Microvirga lotononidis: U0023_06260
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Entry
U0023_06260 CDS
T09656
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
mld
Microvirga lotononidis
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mld03000
]
U0023_06260
Transcription factors [BR:
mld03000
]
Prokaryotic type
Helix-turn-helix
LacI family
U0023_06260
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
WQO28671
LinkDB
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Position
complement(1319664..1320722)
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AA seq
352 aa
AA seq
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MDDIGHKDRPEHEGIVVRAARIQDVAKLADVSTATVSRALATPERVSPEARARVLEAIAK
TGYVPNPAARTLRSQKTYMVLVVLPDLANTFFSKILRGIEETLFEAGYGMIISDLDGSPE
KEAHFAAFTAAGRVDGAILLNGHLFGQSREGEGNPARITIPLVALCEGIPGADIPQIEID
NRAAASRMTQHLASLGHRSIAYVSGPPGNILERERFQGFKDGLAASGLPFDPGLLIAGDY
TIESGMRAGQDIVVRQDRPTAVFCTSDEMAIGLMRTLFSAGLSIPTDISVAGFDDIEFAA
VAEPALTTIRQPRRELGQAAASALIDLLQGRSSPKRIRLETELVIRDSVAPL
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggacgatatcgggcacaaggacaggccggagcacgagggcattgtggtccgcgcggcg
cggatccaggatgtcgccaagcttgccgacgtctcgaccgcgacggtcagccgggcgctt
gcgaccccggaacgggtgtcgcccgaggcccgtgcgcgggtcctggaggcaatcgccaag
accggctacgtgcccaaccccgccgcacgcaccttacggtcccagaagacctacatggtc
ctggtcgttctgccggatctggcaaacaccttcttctccaagatcctgcgcggcatcgag
gagaccctcttcgaggccggatacggcatgatcatcagcgatctcgatggctcgcccgag
aaggaggcccatttcgccgccttcacggcggcgggccgcgtggatggcgcgatcctcctg
aacggtcatctcttcgggcagagccgcgaaggggaggggaacccggcccgcatcacgatc
ccgctcgtggcgctctgcgagggcattcccggcgccgacattccccagatcgagatcgac
aaccgcgctgcggcctcccggatgacccagcatctggcgtctctgggccatcgcagcatc
gcctatgtgagcggccccccgggcaacatcctcgaacgcgaacgcttccagggcttcaag
gacgggctggcggcctcaggtctcccgttcgatccgggcctcctcatcgctggggattac
accatcgagtccggcatgcgggcagggcaggacatcgtggtgcgccaggaccgtccgacg
gccgtgttctgcaccagcgacgagatggccatcgggctgatgcggactctcttctcggct
gggctcagcatcccgacggacatctcggtggcggggttcgacgacatcgaattcgccgcg
gtggccgagccggcgctgaccacgatccgccagccacggcgggaattggggcaggcggcg
gcatcggccctgatcgatcttctccagggccggtcgtcgcccaagcggatcaggctggag
acggagctggtgatccgggacagcgtggcgccgctttag
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