Microvirga lotononidis: U0023_06670
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Entry
U0023_06670 CDS
T09656
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mld
Microvirga lotononidis
Pathway
mld03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U0023_06670 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mld03019
]
U0023_06670 (recQ)
03400 DNA repair and recombination proteins [BR:
mld03400
]
U0023_06670 (recQ)
Enzymes [BR:
mld01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U0023_06670 (recQ)
Messenger RNA biogenesis [BR:
mld03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
U0023_06670 (recQ)
DNA repair and recombination proteins [BR:
mld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
U0023_06670 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WQO28752
LinkDB
All DBs
Position
1417526..1419340
Genome browser
AA seq
604 aa
AA seq
DB search
MIDPAKILHDVFGFPSFREGQEEIVRAVLAGEDVLAVMPTGAGKSLCYQLPTLAREGLTI
VVSPLIALMRDQVAALRHFGVEAGSLNSANDPDENRRVVDSVREGRMRLLYASPERLANT
GTTEWLARAGVNMLAIDEAHCVSQWGHDFRPEYAMLGEVRQRLGNVQTIALTATADVATR
GDIMHRLFEEEPRLFIHGFDRPNLRLAMQAKEHSRRQLFSFLDKHRHESGIVYCSSRDAT
ERLADSLSQAGYRALPYHAGMPQGDRAKNQDIFLQEDGVVMVATVAFGMGIDKPDVRFVA
HAALPKSIEAYYQEIGRAGRDGAPADTLTLYGLDDMRLRRLQIEQSDASDEQKRVERQRL
NALVALCEAPRCRRQTLLAYFGESAEPCGNCDLCIDGVMSFDGTIEAQKLLSAIVRTGER
FGTEHLISILVGEETDSIRRFGHDKLKTFGVGNDRSKTEWRSLLRQIYAAGLVGLELAEY
GRWTLTDKGVAVLKGQERIELRSDVLMKPAERRRRRGRMEAESVVPSDDPLLLDLKGLRT
RLAKEEGVPAYVIFSDRSLIDMAAKRPTTVRAFGEVHGVGQAKLDRYADAFLAVLKAHAE
ARSP
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaccccgccaagattctccacgacgttttcggcttcccctccttccgtgaagga
caggaggagatcgtgcgcgctgttctggccggcgaggacgttctcgccgtcatgccgacc
ggcgcgggcaagtccctgtgctaccagctgccgacgctcgcccgcgaaggcctgaccatc
gtggtctcgcctctcatcgccctcatgcgcgaccaggtggcggcgctccgccatttcggc
gtcgaagcgggaagcctcaactccgccaacgacccggacgaaaaccgccgcgtggtggat
tcggtccgcgaggggcgcatgcgcctcctctatgcctcgccggagcggctggccaatacc
ggcacgaccgaatggctggcgcgggccggcgtgaacatgctcgccatcgacgaggctcat
tgcgtctcgcaatggggccacgatttccggccggaatacgccatgctgggcgaggtgcgc
cagcggctgggcaatgtgcagactatcgcgctcaccgcgaccgccgacgtggcaacgcgc
ggcgacatcatgcaccgcctgttcgaggaggagccgcgcctcttcatccacggcttcgac
cggccgaaccttcgcctcgccatgcaggccaaggagcattcgcggcgccagctcttctcc
ttcctcgacaagcaccggcacgagagcggcatcgtctattgctcgtcccgcgatgccact
gagcggctcgccgattccttgagccaggccggctaccgcgccctgccctatcacgcgggc
atgcctcagggagaccgcgccaagaaccaggacatcttcctgcaggaggacggggtcgtg
atggtggcgaccgtcgccttcggcatgggcatcgacaagcccgacgtgcgcttcgtcgcc
catgcggccctgccgaaatccatcgaggcctattaccaggagatcggccgcgcggggcgc
gacggcgcacccgccgacacgctcactctctacggcctcgacgacatgcgcctgcgccgc
ctgcagatcgagcagagcgatgcatccgacgagcagaagcgcgtggagcgccagcgcctc
aacgcgctggtggccctgtgcgaggcgccgcgctgccgccgccagaccctgctcgcctat
ttcggcgagagcgcggaaccatgcgggaactgcgacctgtgcatcgacggcgtcatgtcc
ttcgacggcaccatcgaggcccagaagctcctctccgccatcgtgcgcaccggcgagcgt
ttcggtaccgagcatctcatcagcatcctcgtgggcgaggagacggattccatccggcgc
ttcggccacgacaagctgaagaccttcggggtgggtaacgaccgctccaagaccgaatgg
cgctcgctcctgcgccagatctacgccgccggactcgtcggcctggagctggcagagtac
ggtcgctggacgctcaccgacaaaggcgtcgccgtgctcaagggccaggagcggatcgag
ctgcgctccgacgtgctcatgaagcccgctgagcgccgccgcaggcgcggccggatggag
gcggaatccgtcgtcccgtccgacgatcccctgctcctcgacctgaagggcctgcgcacg
cgcctcgccaaggaagagggcgtgccggcctacgtgatcttctccgaccgcagcctcatc
gacatggcggccaagcgcccgaccaccgtgcgggccttcggcgaagtccacggggtggga
caggccaagctcgatcgctatgcggatgcgtttctcgccgtgctgaaggcacatgccgag
gcacggtcgccttag
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integrated database retrieval system
