Microvirga lotononidis: U0023_08550
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Entry
U0023_08550 CDS
T09656
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mld
Microvirga lotononidis
Pathway
mld00300
Lysine biosynthesis
mld00470
D-Amino acid metabolism
mld01100
Metabolic pathways
mld01110
Biosynthesis of secondary metabolites
mld01120
Microbial metabolism in diverse environments
mld01230
Biosynthesis of amino acids
Module
mld_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
U0023_08550 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
U0023_08550 (dapF)
Enzymes [BR:
mld01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
U0023_08550 (dapF)
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Motif
Pfam:
DAP_epimerase
Pro_racemase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WQO29097
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Position
complement(1804025..1804909)
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AA seq
294 aa
AA seq
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MSALSNSRFLKMNGLGNEITVLDLRGSSHRVSPAEARAIAADPRSRFDQLMVLHDPVTPG
TDAYMRIYNTDGSESGACGNGTRCVAWAMTTDPVMSRPVEDDLVLETKAGLLPVERVSDR
VFTVDMGPPRLAWNEIPLRDPYPDTRTIAVDTRLAEAPELQGPSAVSMGNPHAVFWVEDA
QTYDLAAIGPAFEHDPVFPERANISFAQVTGPDRIILRVWERGAGATRACGSAACATLVA
AARKGLTGRKAVVTLPGGDLVIEWRESDGHVLMTGPTELEHEGTFSPALFTEVA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccctttcgaacagccgtttcctgaaaatgaacggtctcggcaacgagatcacc
gtgctcgacctgcgcggctcctcccatcgggtgagcccggcggaagcgcgcgccatcgcg
gccgatccgcgctcgcgcttcgaccagctcatggtgctgcacgaccccgtcacgccgggc
accgacgcctatatgcgcatctacaacacggacggctcggaatccggtgcctgcggcaac
ggcacccgctgcgtcgcctgggcgatgacgacggatccggtcatgagccgcccggtcgag
gacgacctcgtgctcgaaaccaaggcgggtctgctgccggtggagcgcgtctcggacagg
gtcttcaccgtcgacatgggcccgccgcgcctcgcctggaacgagattcccctgcgcgat
ccctatccggacacccgcacgatcgcggtcgacacccggcttgccgaagcccccgagctt
cagggcccctccgccgtcagcatgggcaacccacatgccgtcttctgggtcgaggacgcc
cagacctatgacctcgcggccatcggcccggccttcgagcacgatccggtcttcccggag
cgggccaacatctccttcgcccaggtcaccggccccgaccgcatcatcctgcgcgtgtgg
gagcgcggtgccggcgccacccgcgcctgcggctccgccgcctgcgcgaccctcgtggcg
gccgcccgcaagggactgacgggccgcaaggccgtggtgacgctccccggcggcgatctc
gtcatcgaatggcgcgagagcgacggccacgtgctcatgaccggcccgacggagctggag
cacgagggcaccttctcgcccgccctgttcaccgaggtggcctga
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