KEGG   Microvirga lotononidis: U0023_08550
Entry
U0023_08550       CDS       T09656                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
mld  Microvirga lotononidis
Pathway
mld00300  Lysine biosynthesis
mld00470  D-Amino acid metabolism
mld01100  Metabolic pathways
mld01110  Biosynthesis of secondary metabolites
mld01120  Microbial metabolism in diverse environments
mld01230  Biosynthesis of amino acids
Module
mld_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:mld00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    U0023_08550 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    U0023_08550 (dapF)
Enzymes [BR:mld01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     U0023_08550 (dapF)
SSDB
Motif
Pfam: DAP_epimerase Pro_racemase PhzC-PhzF
Other DBs
NCBI-ProteinID: WQO29097
LinkDB
Position
complement(1804025..1804909)
AA seq 294 aa
MSALSNSRFLKMNGLGNEITVLDLRGSSHRVSPAEARAIAADPRSRFDQLMVLHDPVTPG
TDAYMRIYNTDGSESGACGNGTRCVAWAMTTDPVMSRPVEDDLVLETKAGLLPVERVSDR
VFTVDMGPPRLAWNEIPLRDPYPDTRTIAVDTRLAEAPELQGPSAVSMGNPHAVFWVEDA
QTYDLAAIGPAFEHDPVFPERANISFAQVTGPDRIILRVWERGAGATRACGSAACATLVA
AARKGLTGRKAVVTLPGGDLVIEWRESDGHVLMTGPTELEHEGTFSPALFTEVA
NT seq 885 nt   +upstreamnt  +downstreamnt
atgagtgccctttcgaacagccgtttcctgaaaatgaacggtctcggcaacgagatcacc
gtgctcgacctgcgcggctcctcccatcgggtgagcccggcggaagcgcgcgccatcgcg
gccgatccgcgctcgcgcttcgaccagctcatggtgctgcacgaccccgtcacgccgggc
accgacgcctatatgcgcatctacaacacggacggctcggaatccggtgcctgcggcaac
ggcacccgctgcgtcgcctgggcgatgacgacggatccggtcatgagccgcccggtcgag
gacgacctcgtgctcgaaaccaaggcgggtctgctgccggtggagcgcgtctcggacagg
gtcttcaccgtcgacatgggcccgccgcgcctcgcctggaacgagattcccctgcgcgat
ccctatccggacacccgcacgatcgcggtcgacacccggcttgccgaagcccccgagctt
cagggcccctccgccgtcagcatgggcaacccacatgccgtcttctgggtcgaggacgcc
cagacctatgacctcgcggccatcggcccggccttcgagcacgatccggtcttcccggag
cgggccaacatctccttcgcccaggtcaccggccccgaccgcatcatcctgcgcgtgtgg
gagcgcggtgccggcgccacccgcgcctgcggctccgccgcctgcgcgaccctcgtggcg
gccgcccgcaagggactgacgggccgcaaggccgtggtgacgctccccggcggcgatctc
gtcatcgaatggcgcgagagcgacggccacgtgctcatgaccggcccgacggagctggag
cacgagggcaccttctcgcccgccctgttcaccgaggtggcctga

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