Microvirga lotononidis: U0023_09235
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Entry
U0023_09235 CDS
T09656
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mld
Microvirga lotononidis
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mld03016
]
U0023_09235 (thpR)
Enzymes [BR:
mld01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
U0023_09235 (thpR)
Transfer RNA biogenesis [BR:
mld03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
U0023_09235 (thpR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
DUF3248
Motif
Other DBs
NCBI-ProteinID:
WQO29225
LinkDB
All DBs
Position
complement(1936381..1936917)
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AA seq
178 aa
AA seq
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MPRLFTGIEIPAEIGLALSSFRGGLPGARWVDPENYHLTLRFIGDIDERMADDVTSILGE
RRQRAPLIITIDGLDTFGGGKPRAVFARVVGNGDLNELQAEQERLVRQVGLAPETRRFTP
HVTLARLRNVSPVDVADYIATRGHFPKLTFTADRFVLYSSRNSVGGGPYIVEAAYPLS
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcctgttcaccggcatcgagatcccggccgagatcggcttggccctttcgagc
tttcgcggcggccttcctggcgcacgctgggtcgatcccgagaactatcacctgaccttg
cggttcatcggcgacatcgacgagcgcatggcggacgacgtcacgtcgatcctcggcgaa
cggcgccagcgcgctccgctcatcatcaccatcgacgggctcgacaccttcggcggcggg
aagccccgcgcggtcttcgcccgcgttgtcggcaacggcgacttgaacgagctgcaggcg
gagcaggaacgcctcgtgcgccaggtcggcttagccccggagacgcgccggttcaccccg
cacgtgaccctggcgcggcttcgcaatgtgtcccccgtcgatgtggcggactacatcgcc
acccggggccattttccgaagctgaccttcacggccgaccgcttcgtcctgtactcgtcc
cggaactccgtcggcggcggcccctacatcgtcgaggcggcctatcccttaagctag
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