Microvirga lotononidis: U0023_18185
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Entry
U0023_18185 CDS
T09656
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mld
Microvirga lotononidis
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mld03016
]
U0023_18185
Enzymes [BR:
mld01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
U0023_18185
Transfer RNA biogenesis [BR:
mld03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
U0023_18185
Prokaryotic type
U0023_18185
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
WQO26587
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All DBs
Position
complement(3838506..3839642)
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AA seq
378 aa
AA seq
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MERARPHRIGTGRDRNRWVGMSWLVQPRLVNDPFSDPGLYLDFRYGRRAILFDLGDVAAL
SSRELLRVSHVFVSHTHVDHMAGFDRLFRLCLHRPLPLTLIGPPGFAAQVEHRIRGFTWN
LLDENSVDFCMRAMDYDGAGLTKATEFHAREAFTRHDIAPPGFPQGVAWMEDEFSIEAVA
LDHGIPSLAFALREVLQVNVWRGVLDDLGLPPGAWLNEAKRAVRLGLPDDHPITVPSGGS
VRLSDLKGRALRVAPGQVVAYVTDAAPHAENRAKILRLAHRADQLFIEAVFLERDRPLAV
ASLHLTAHEAGSIAREARVRHVTPFHHSARYLSEPEALREEVIESFHAENREAMPDQSLS
EIGRRPREFATDRACGSN
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggaacgggcccgccctcatcgcatcggaaccggccgggaccggaaccgttgggtcggg
atgagttggcttgttcaaccccgtctcgtgaacgatcctttcagcgatccaggcctttat
ctcgatttccggtacggccgccgggccattctcttcgacttgggcgatgtggccgctctc
tcctcccgtgaattgctgcgggtgagccatgtcttcgtctcgcacacccatgtcgatcac
atggccggcttcgaccggctgttccggctctgcctccatcgcccgctcccgctcaccctg
attggtccaccgggctttgccgcgcaggtcgaacaccgaatccggggcttcacctggaat
cttctggatgagaactccgtcgatttctgcatgagggccatggattacgacggcgcgggc
ctgacgaaggccacggagtttcatgcacgagaagcctttacccggcacgacatcgcgccg
cccgggttcccgcagggcgtcgcctggatggaggacgagttcagcatcgaggccgtcgcc
ctggaccatggcatcccctcgctcgccttcgccctgagggaggtcctccaggtgaatgtg
tggcggggcgtgctggatgacctggggctccccccaggtgcatggctcaacgaggccaag
cgcgcggttcgcctcggcctgcccgacgaccatcccattacggttccttcagggggcagc
gtccggctcagcgatctgaaaggccgggccttgcgcgtcgctcccgggcaggtggtcgcc
tatgtgacggatgccgcaccccatgccgaaaaccgcgcaaaaattcttcggctcgcccac
cgggccgaccagctcttcatcgaggccgtcttcctggagcgcgaccggccccttgccgtc
gcttccctccacctgacggctcacgaggccgggtccatcgcccgcgaagcccgcgtcagg
catgtaacgcccttccaccactcggcacgctacctgtcggagccggaggctctgcgggag
gaggtcatcgagagcttccatgccgagaatcgggaggcaatgccggaccaatctcttagt
gagattggaagacggcctcgtgaatttgccacggatcgggcctgcggctcgaactga
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