Microvirga lotononidis: U0023_19265
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Entry
U0023_19265 CDS
T09656
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mld
Microvirga lotononidis
Pathway
mld03410
Base excision repair
mld03430
Mismatch repair
mld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U0023_19265 (recJ)
03430 Mismatch repair
U0023_19265 (recJ)
03440 Homologous recombination
U0023_19265 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mld03400
]
U0023_19265 (recJ)
DNA repair and recombination proteins [BR:
mld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
U0023_19265 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
U0023_19265 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
U0023_19265 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
LisH_2
Bap31_Bap29_C
Motif
Other DBs
NCBI-ProteinID:
WQO26781
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All DBs
Position
4068090..4069901
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AA seq
603 aa
AA seq
DB search
MTESSPLQLPKPFLGVSNSALGRTWVERCDAAQGTIALAIAQTHGLPDVLSRVLAGRGVG
IHETERFLNPRLRDLMPDPHGLTDMEIAASRLADSVQRNEKVAIFGDYDVDGACSAALLA
EYLRACGLDYAIHIPDRITEGYGPNVDAIRALKQQGADLLVTVDCGTASIEPLAEAKRLG
LDPIVLDHHQAPEQLPDARAVVNPNRQDDLSGLGYLCAAGVVFLFLVALNRTLRSRGFFQ
GRAEPDLMGSLDLVALATVADVVPLIGLNRAFVRQGLAIMKSRRRVGLAALLDTAGLAGA
PESWHLGYLVGPRINAGGRIGDAALGSRLLLTEDPVQAGRLAAELDRLNRERQAIEVVAV
AEAEAQAMMALERVPDMPVLVTASAEWHPGVVGLISARTKERFRRPAFAFTLNPDGTATG
SGRSVPGVDLGYAVRAAVDTGIAIKGGGHTMAAGVTIQAVDLERFLTFVTDRLTEPVSTM
RLRDNFAIDATLTAAGAQPAVVAALERAGPFGQGQPEPVFVFPQHRLVEAREVGSGGHMR
VKLRGGDGSVIGGIAFRAAGQPLGIALSQAMGNTLHVAGTLSIDRWGGNEKVEVRIMDAA
RPE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaatcatctcctctccagctgccgaaaccctttctcggcgtcagcaattccgcc
ctcgggcgcacctgggtcgagcgctgcgatgccgcccaggggacgatcgcgctcgccatc
gcccagactcatggcctgccggacgtcctctcccgggtgctggccgggcggggtgttggc
atccatgagacggaacgcttcctgaacccgcgcctgcgggacctcatgccggatccgcat
gggctgactgacatggaaattgcggcctcccggctggccgattccgtgcagcgcaacgag
aaggtggcgatcttcggcgattacgacgtggatggcgcctgcagcgcggcgctgctggcc
gaatacctgcgcgcctgcgggctggactacgccatccacatcccggaccggatcaccgag
ggctacggcccgaacgtggatgcgatccgggcgctgaagcagcagggcgccgaccttctc
gtgaccgtcgattgcggcacggccagcatcgaacctctggcggaagcgaagcggctcggt
ctcgatcccatcgttctcgatcaccatcaggcgcccgagcagctgcccgacgcgcgcgcc
gtcgtgaacccgaaccggcaggacgatctctcgggcctcggctatctctgcgccgccggc
gtggtgttcctcttcctggtcgcattgaaccggacgctgcgctcccgcggcttcttccag
ggacgggcggagccggacttgatggggagcctcgatctcgtcgctcttgcgaccgtggcc
gacgtggtgccgctcatcggcctgaaccgggccttcgtgcggcagggcctcgccatcatg
aagagccgccgccgggtggggctggcggcgcttctcgatacggcaggcctcgcgggagcg
ccggaaagctggcatctgggctatctcgtcgggccgcgcatcaacgcgggcggacgcatc
ggcgatgcggccttgggctcgcggctcctgctgaccgaggatccggtccaggccgggcgg
ctcgccgccgaactcgacaggctcaaccgcgaacgtcaggccatcgaggtcgtggccgtc
gcggaagcggaggcacaggccatgatggcactggagcgggtccccgacatgcctgttctc
gtgacggcttccgccgagtggcacccgggcgtggtcggcctgatctccgcccgcaccaag
gagcgcttccgccgtcccgcctttgccttcacgttgaacccggacggcacggcgaccggc
tccggtcgctcggtccccggcgtggatctgggctacgcggtgcgcgccgccgtcgatacg
ggtatcgccatcaagggcggcggtcataccatggcggccggcgtgacgatccaggccgtc
gatctggagcggttcctcaccttcgtcaccgacaggctcacggagcccgtgagcaccatg
cgcctcagggacaacttcgccatcgacgcgaccctgacggccgcaggcgcccagccggcg
gtggtcgcggccctggaacgggcagggccgttcggccagggccagccggagccggtcttc
gtgttcccccagcatcggctcgtcgaagcccgcgaggtaggcagtggcggtcatatgcgc
gtgaagctcaggggcggcgacggcagtgtcatcggcggaatcgccttccgggctgcgggc
cagcccctcggcatcgccctgtcgcaggccatgggtaacacgctccatgtggccgggacg
ctctccatcgatcgttggggcggcaacgagaaggtcgaggtgcggatcatggatgccgcg
aggccggaataa
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