Microvirga lotononidis: U0023_20600
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Entry
U0023_20600 CDS
T09656
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mld
Microvirga lotononidis
Pathway
mld03030
DNA replication
mld03430
Mismatch repair
mld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U0023_20600 (dnaE)
03430 Mismatch repair
U0023_20600 (dnaE)
03440 Homologous recombination
U0023_20600 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mld03032
]
U0023_20600 (dnaE)
03400 DNA repair and recombination proteins [BR:
mld03400
]
U0023_20600 (dnaE)
Enzymes [BR:
mld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U0023_20600 (dnaE)
DNA replication proteins [BR:
mld03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U0023_20600 (dnaE)
DNA repair and recombination proteins [BR:
mld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U0023_20600 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
T2SSK
DUF655
Motif
Other DBs
NCBI-ProteinID:
WQO27026
LinkDB
All DBs
Position
complement(4371020..4374493)
Genome browser
AA seq
1157 aa
AA seq
DB search
MARILHDIGFVHLHVHSSYSLLEGALKVAQLAKLAAADKQPALALTDTNNLFGALEFSEK
LAGSGIQPIAGVQLSVCFEEPDPVARVVPQPSNIVLLAQNEEGYRNLMRLVSHAYFGVPL
GEDPRVMAPVLSAHSEGLIALTGGFSGPLDCALRNGARQDLAQARLDLLKNAFGHQLYVE
IQRHSLEDQRLIEGELLALADRNGLPIVAANEPFFPSSKDYEAHDALLAIAEGQIVSNPD
RRRLSPEHHFKTRQQMMELFADLPDALQASVEIAMRCATRVRTRKPILPNFGTGPDAAAL
DEGEELKRQAEEGLEKRLAAHGPAPGLTEQDYRDRLAYEIGIIRNMKFPGYFLIVSDFIK
WAKDHNIPVGPGRGSGAGSLVAYALTITDLDPLRFALLFERFLNPERVSMPDFDIDFCVE
GRERVIEYVQQRYGEEQVAQIITFGTLLARGVIRDVGRVLEMPYGQVDKLTKLVPQNPAN
PVTLAQAIEGEPKLQAAIDEEPVVKRMLDIAQKLEGLHRHASTHAAGVVIGDRPLQELVP
LYRDPKTGMRVTQFNMKWVEQAGLVKFDFLGLKTLTVLRTAVDLIRRKGIEVDLSALPLD
DRKTYEMLRRGETVGVFQVESAGMRKALVEMETDRFEDIIALVALYRPGPMANIPVYCAR
KLGKDEHNKKDWYPHDKLEPILRETFGIIVYQEQVMEVAKVLSGYSLGDADLLRRAMGKK
IKAEMDAQRERFVSGAKEGGLDKGKSNEIFDLLAKFADYGFNKSHAAAYALVAFQTAYLK
ANHAVEFLAASMTLDLDNTDKLSEFRREAQRLGFKVIPPSINRSGVVFDVQYDQEGKGQI
LYALAAVKGVGRQAIEAVVEARGDEPFKDLADFARRINPKAINKRTLENLIAAGAFDELE
PDRAKACASIDAMMSLAQQSHEAANGGMMDMFGGVAAAGVQLRIGPYEPWPSAERLQREY
DAIGFFLSGHPLDEYGDLLKKLRVQTWMEFCRSVRAGNSVGRVAATILDRQERRTKTGNK
MGILTLSDQTGQFEAIIFSEGLQRLRDVLEPGSAVVLMLQAGLEGEEVRARIGMAEPLDE
AVAKHQKSMRIFLRDERPITSVFERLKARGEGEVSLVLILDDGDREVEVKLPGKYMATPQ
IAGALRAVPGVVDVHVN
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcattcttcacgatatcggtttcgtccatctgcatgtccattcctcgtactcg
ttgctcgagggggcgctgaaggtcgcgcaactggccaaactcgccgcggcggataagcag
ccggccctcgcactcactgacaccaacaatctcttcggtgccctggagttttccgagaag
ctcgcgggttccggcatccagcccatagcgggcgttcagctgtccgtctgcttcgaggag
ccggatccggttgcccgcgtggtgccgcagccgtcgaacatcgtgctgctcgcgcagaac
gaggagggttatcgcaacctcatgcgtctcgtgagccacgcctatttcggcgtgcctctg
ggcgaggatccgcgcgtgatggcgccggtgctctcggctcacagcgaggggctgatcgcc
ctgacaggcggtttctcggggcccctcgattgcgccctgcgcaacggggcgcgtcaggac
ttggcgcaggcccggcttgatctcttgaagaacgccttcggccaccagctctatgtcgag
atccagcgccatagcctcgaggaccagcgcctgatcgaaggagagttgctcgcgctggcg
gatcgaaacgggctgcccatcgtggcggcaaacgaacccttcttcccgtcgtccaaggac
tacgaggcgcacgacgctctgctcgccatcgccgaagggcagatcgtctcgaatccggat
cgccgccgtctgtcgccggagcatcacttcaagacgcgccagcagatgatggagctgttc
gcggatctccctgacgcgctccaggccagcgtcgagatcgccatgcgctgcgccacgcgc
gtgagaacccgcaagcccatcctgccgaatttcggaaccggtcccgatgcggctgcgctg
gacgagggcgaggagctgaagcggcaggcggaagaggggctcgagaagcgcctcgccgct
catggtcccgcgccgggcttgaccgagcaggattaccgcgaccggctcgcctatgagatc
ggcatcatccggaacatgaagttcccgggttacttcctgatcgtgtccgacttcatcaag
tgggcgaaggatcacaacattccggtggggccgggccgtggctcgggtgcgggctcgctc
gtcgcctatgcgctcaccatcaccgatctcgatcctctgcggtttgctctgctcttcgag
cgcttcctcaacccggaacgcgtctcgatgccggacttcgatatcgacttctgcgtcgag
gggcgcgagcgcgtcatcgaatacgtgcagcagcgctacggcgaggagcaggtcgctcag
atcatcaccttcggtacgctgctcgcccgtggcgtgatccgcgacgtcggccgcgtgctc
gaaatgccttacggccaggtcgacaagctcaccaagctcgtgccgcagaacccggccaat
ccggtgacgctcgcgcaggccatcgagggcgagccgaagctgcaggcggccatcgacgag
gaaccggtcgtcaagcgaatgctcgacatcgcgcagaagctcgaaggcctgcaccggcac
gcctcgacccacgccgctggcgtggtgatcggcgaccgtcccctccaggaactggtgccg
ctctaccgagacccgaagaccgggatgcgcgtgacccagttcaacatgaaatgggtcgag
caggcgggcctggtgaagttcgactttctgggcctcaagactcttaccgttctgcgcacg
gcggtcgatctcattcgccgaaagggcatcgaggtcgacctttcggctctgccgctcgac
gatcgcaaaacctacgagatgcttcggcgcggcgagacggtcggcgtgttccaggtggaa
tcggcgggcatgcgaaaagcgctcgtcgagatggagaccgaccgcttcgaggacatcatc
gccctcgtggcactctaccgtccgggcccgatggcgaacatcccggtctattgcgcacgc
aagctcggcaaggacgagcacaacaagaaggactggtacccccacgacaagctggagccg
atcctgcgcgagaccttcggtatcatcgtgtaccaggagcaggtgatggaggtggcgaag
gtcctctccggatactcgctcggcgacgccgaccttctgcgccgcgccatgggtaagaag
atcaaggccgagatggacgcgcagcgcgagcgcttcgtctccggcgcgaaggagggcggc
ctcgacaaggggaagtcgaacgagatcttcgacctgctcgccaagttcgcagattacggc
ttcaacaagagccacgcggcagcctacgcgctggtcgcgttccagacggcctatctgaaa
gccaatcatgcggtcgagttcctcgccgcatcgatgaccctcgatctcgacaacaccgac
aagctgtcggaattccgacgcgaggctcaacgcctcggcttcaaggtcatcccgccgtcg
atcaaccgttccggcgtcgtcttcgacgtgcagtacgatcaggagggcaaggggcagatt
ctgtatgctcttgcggccgtgaaaggcgttggtcggcaggccatcgaggccgtggtcgag
gcgaggggcgacgagcccttcaaggatctcgccgacttcgcccggcgcatcaatccgaaa
gccatcaacaagcgcacgctcgaaaacctcatcgcggccggcgccttcgacgaactggag
ccggaccgcgcgaaggcttgcgcatccatcgacgcgatgatgagcctcgcccagcaatcg
catgaggcggccaatggcggcatgatggacatgttcggcggcgtcgccgcggccggcgtg
cagctgcggatcggaccctacgagccctggccctccgccgagaggctgcagcgggaatac
gacgccatcgggttcttcctctcaggccatccgctcgacgaatacggcgatcttctcaag
aaactccgcgtccagacctggatggagttctgccgttctgtaagggcgggcaattccgtg
gggcgcgtcgccgccaccatcctcgaccggcaggagcgccggaccaagaccggcaacaag
atgggcatcctcaccctgtcggatcagaccggacagttcgaggccatcatcttctccgag
gggctccagcgcctgcgcgacgttctcgaacccggatccgccgtggtcctgatgctccag
gccggtctcgaaggcgaagaggtgagggcgcggatcggcatggccgagcccctggacgag
gccgtcgccaagcaccagaagagcatgcggatcttcctgcgcgacgagcggccgatcacg
agcgtctttgagcgcctcaaggcccggggcgagggggaggtttccctcgtcctgatcctc
gacgacggcgaccgggaggtcgaagtcaagctccccggcaagtacatggccaccccccag
atcgccggtgctctccgcgcggtgccgggggtcgtggacgtccacgtgaactga
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