Microvirga lotononidis: U0023_20800
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Entry
U0023_20800 CDS
T09656
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
mld
Microvirga lotononidis
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mld01002
]
U0023_20800
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mld01011
]
U0023_20800
Peptidases and inhibitors [BR:
mld01002
]
Cysteine peptidases
Family C82
U0023_20800
Peptidoglycan biosynthesis and degradation proteins [BR:
mld01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
U0023_20800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
WQO27065
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All DBs
Position
complement(4412593..4413861)
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AA seq
422 aa
AA seq
DB search
MLSRRTLLTGSLALIFTPATGALAQQFAQSQAEWSQNYEAVSRTRVQRTSTPMLSQESLA
ATEQMIEYYRNIAARGGWMPVQGVQGLRVGSKSPAVVALRQRLIITGDLDQAAGESPIYD
SYVEAGVRRFQARHGISSTGTMTAPTVAAMNVPVDVRIRQLEINVSRLRTLVAGGLPNRY
VVANIPAALVETVEGGVVHTRHAAGVGKSDRQSPLLNTKVVEVNFNPFWTVPASIIKKDL
IPKMQKEPNYLTDNKIRIFNGNTEIAPSQVNWFSDEATRYRFRQDPGGELNSMGFVRINI
PNKDGVYMHDTPSKGIFGDDFRFVSSGCIRVQNVRDYIEWLLKDTPGWSREQIDATFKSG
ERIDARLAQPVPIHWIYMTAWATPDGLVQFRDDIYNKDGLGNAIPVASRTPTEPDEEMFL
QN
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctcgccgtaccctcctgaccggatcgctcgccctgatcttcacgccggctacc
ggagccctggcccagcaattcgctcagagccaggccgagtggtcgcagaactacgaggcg
gtgtcacgcacgcgcgtgcagcgcacctcgacccccatgctgtcgcaggaatccctcgcc
gcgaccgagcagatgatcgagtattaccgcaacatcgcggcccgcggcggctggatgccc
gtccagggcgttcagggcctgcgcgtcggctccaagagcccggcggtcgtcgcattgcgc
cagcggctcatcatcaccggcgatctcgatcaggccgccggcgaatcgccgatctatgat
tcctacgtcgaggccggcgtgcgccgcttccaggcccgccacggcatcagctccaccggc
accatgacggccccgacggtcgcggccatgaacgtgcccgtggacgtccgcatccgtcag
ctcgagatcaacgtgtcccgcctgcgcaccctggtggccggcggtctccccaaccggtac
gtggtcgccaacatcccggccgccctggtcgagacggtggagggcggcgtcgtccacacc
cgccatgcggccggcgtcggcaagagcgaccgtcagtcgccgctcctgaacaccaaggtg
gtcgaggtcaacttcaacccgttctggaccgtgcccgcttcgatcatcaagaaggatctg
atcccgaagatgcagaaggagccgaactacctgacggacaacaagatccgcatcttcaac
ggcaacacggagatcgcgccgtcgcaggtgaactggttctcggacgaggcgacccgctac
cgcttccgccaggatccgggcggcgagctcaattccatgggcttcgtgcgcatcaacatc
ccgaacaaggatggcgtctacatgcacgatacgccctccaagggcatcttcggcgacgat
ttccggttcgtgtcctcgggctgcatccgcgtgcagaacgtgcgcgattatatcgagtgg
ctcctgaaggacacccctggctggagccgcgagcagatcgacgccaccttcaagtccggc
gagcgcatcgacgcgcgcctcgcgcagccggttccgatccactggatctacatgaccgcc
tgggcgacgccggacggcctcgtccagttccgcgacgacatctacaacaaggacggcctc
ggcaacgccatcccggtcgccagccgcaccccgaccgagccggacgaagagatgttcctg
cagaactga
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