Microvirga lotononidis: U0023_22820
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Entry
U0023_22820 CDS
T09656
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mld
Microvirga lotononidis
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mld03016
]
U0023_22820 (rnd)
Enzymes [BR:
mld01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
U0023_22820 (rnd)
Transfer RNA biogenesis [BR:
mld03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
U0023_22820 (rnd)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
WQO27437
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All DBs
Position
4846412..4847572
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AA seq
386 aa
AA seq
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MDLITSTDALAAACNRLSQHPFVTVDTEFLRETTYYPKLCLIQMAGPDPADAYLIDPLAE
GISLEPFMTLMANPDVVKVFHSARQDLEIVWNLGGIVPIPLFDTQVAAMVCGYGDSVSYE
QLANDLAKAKIDKSSRFTDWSRRPLTDAQLTYALSDVTHLVQVYEALMAQLQKNGRLEWL
AEEMAILTSPETYQADPGNAWRRLAGRLRKPREIAVLMEVSAWREREAQARDVPRGRILK
DDAVIDIATSAPRSVEALGRLRTIPNGFERSRTGGEILDAVERALARDMATIPVPERSRG
RSNTGSVVDLLKVLLKAVAEQEGVAPKIIATVEELEAIADSDDADVPSLHGWRRKLFGDK
ALALKNGELGLVLERGRVKLRAIAEV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacctgatcacctccaccgacgccctggccgccgcctgcaaccgtctcagccagcat
ccgttcgtgaccgtcgacacggagttcctgcgcgagaccacctattacccgaagctctgc
ctgatccagatggcgggccccgaccctgcggacgcctatctcatcgatcccctggccgag
ggcatcagccttgagccgttcatgacgctgatggccaacccggacgtggtgaaggtcttc
cattcggcccggcaggacctggagatcgtctggaacctcggcggcatcgtgccgatcccc
ctcttcgacacccaggtcgccgccatggtgtgcggctatggggactcggtctcctacgag
cagcttgccaacgatctggccaaggccaagatcgacaaatcctcccgcttcaccgactgg
tcgcgccgcccgctgaccgacgcgcagctgacctacgccctctcggacgtcacccatctg
gtgcaggtctacgaggcgctgatggcgcagctgcagaagaacggccggctcgaatggctc
gccgaggagatggcgatcctcacttctccggaaacctaccaagccgacccgggcaatgcc
tggcgccgtctcgccggccgtctccgcaagccgcgcgagatcgccgtgctcatggaggtc
tccgcctggcgcgagcgtgaggctcaggcgcgggacgtgccccgcgggcgcatcctcaag
gacgacgcggtgatcgacatcgccacctcggccccgcgcagcgtcgaggcactgggccgc
ctgcgcaccatccccaacggcttcgagcgctcccgcaccgggggcgagatcctggacgcg
gtggaacgggcgctggcccgcgacatggcgaccatccccgtgccggagcgcagccgcggc
cgttcgaacaccggatccgtcgtagatctgctgaaggtgctgctcaaggcggtggccgag
caggagggcgtcgcgcccaagatcatcgccaccgtcgaggagctggaagccatcgccgac
agcgacgatgccgacgtgccgtccctgcacggctggcgccgcaagctgttcggggacaag
gcgctcgcccttaagaacggcgagctcggtctggtgctggagcgcggccgggtgaagttg
agggcgatcgctgaagtctga
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