Microvirga lotononidis: U0023_25855
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Entry
U0023_25855 CDS
T09656
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mld
Microvirga lotononidis
Pathway
mld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
U0023_25855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mld03400
]
U0023_25855
Enzymes [BR:
mld01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
U0023_25855
DNA repair and recombination proteins [BR:
mld03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U0023_25855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
HHH_5
Viral_helicase1
NAT10_TcmA_helicase
AAA_11
HHH_3
AAA_29
HHH_2
nSTAND3
MeaB
PIF1
NTPase_1
AAA_22
AAA_16
RsgA_GTPase
AAA_17
AAA_28
DEAD
SLFN-g3_helicase
ABC_tran
TraI_hel_assoc_N
NACHT
NPHP3_N
MobB
UvrD-helicase
T2SSE
CbiA
HHH
cobW
nSTAND_NTPase5
AAA_18
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
WQO30838
LinkDB
All DBs
Position
unnamed1:499682..501880
Genome browser
AA seq
732 aa
AA seq
DB search
MNQMIRPSQTDQRPALETLAGSVERVTFHNADNGFAVLKVHTRGKRDLVTVVGHTPAVSA
GEWITASGLWISDRTHGLQFKAEVLKTTPPTGAEGIEKYLASGQMRGIGPAMAKRIVAAF
GVDTFEIIEAAPERLTEVPGIGPMRASRIVAGWAEQKAVREIMIFLHAHGVGTARAVRIF
KTYGYESVQVMTEDPYQLAKDVRGIGFRTADAIAAKLGMEKTAPQRIRAGISFALQTATD
EGHCALPVEALTRLAEQLLEVDEALIRTAIVEELSKGEIVSDTIGEETCLFLKGLYLAEQ
AIASRLIERASGPAPWPEIDLDKAIPWVESRTGKTLAASQREALKLVLGSKVAVVTGGPG
VGKTTLLDTILRLLVAKGVQVALAAPTGRAAKRMTEQTGLEAKTIHRLLEIDPKHGGFSR
NEENPLDCDLLVVDETSMVDVPLMNALTKAIPSHAGLLLVGDVDQLPSVGSGQVLADVIA
SERIPVARLTEVFRQAAESRIVVNAHRINKGQMPEVPRAGEETDFYFVEITDPEEGVPKI
IQMIKERMPRRFGLDPMKDIQVLCPMNRGVLGARNLNIQLQEVLNPNPPAKVERFGWRFS
PGDRVMETQNDYDRDVFNGDLGTVVRIDDEEGALIASFDGREVSYPFGELDTLMPAYATT
IHKSQGSEYPAVIIPVVTQHFTMLARNLLYTGVTRGKRLVVLVGQKKAVGIAVRGGQMKR
RWTKLREWLAAH
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagatgattcgcccatcacaaactgatcagaggcctgccctcgagacgctcgcg
ggttcggtggagcgcgtcactttccacaatgcggacaatggctttgccgtcctgaaggtg
catacgcggggcaaacgtgaccttgtgacagtcgtgggccataccccggcggtgtcggcc
ggggagtggatcacggcaagcggactatggatcagcgaccgcacgcacggcctccaattc
aaggccgaggttttgaagaccaccccgccgactggggcagagggcattgagaagtatctg
gcctcaggccagatgcgcggcatcgggccagctatggccaagcgcatcgtcgctgccttt
ggcgtggacacctttgagatcattgaggccgcccctgagcgcctcacggaggtgcccggc
atcggccctatgcgggcctctcgcattgtggcgggctgggctgagcagaaggcggtgcgg
gagatcatgattttcctccacgcgcacggggtcggcacggcgcgagccgtacggatcttc
aagacctacggctatgagtccgttcaagtcatgaccgaggacccgtaccagctggccaag
gacgtgcgtggcatcggcttccggacggcggacgccattgcagccaagctcgggatggaa
aagactgctcctcagcgcatccgggctggtatctccttcgccctccagacagcgacggat
gaggggcactgcgcattgccggtcgaggctctcacccggctggccgagcaactccttgaa
gtggatgaggccctgatccgcaccgccatcgtcgaggagctgtccaagggcgagatcgtc
tcggacaccatcggtgaggagacctgcctcttcctgaaagggctgtacttggccgagcag
gcgattgcctcccggttgatcgagcgagcgtctggtccagcaccttggcccgagatcgac
ctcgacaaggccattccctgggtcgagagccgcaccggcaagaccctggcggcctcgcag
cgtgaggcgctgaagctggtgctcggctcgaaggtagccgtggtaaccggcggtccaggc
gtcggcaagacgacgctgctcgacaccatcctgcgcctgctcgtcgccaagggcgtgcag
gtggcgctggcggcgccgacgggacgcgcagcaaagcgcatgaccgaacagaccggcctg
gaggccaagaccattcaccgtctgctggagatcgatccaaagcacggcggcttctcgcgc
aacgaggagaacccgctcgactgcgatctgctggtggtggacgagacctccatggtggac
gtgccgctgatgaatgccttgacgaaggctattccctctcatgcgggcttgctcctggtg
ggtgacgtggatcagttaccctctgtcggctcggggcaggtgctggccgacgtcatcgcc
tccgagcgcatcccagtcgcccgtctgactgaggtcttccggcaggcggcagaaagccgg
atcgtggtcaacgcccaccggatcaataagggtcagatgcccgaggtgccaagggctggc
gaggagactgacttctacttcgtggaaatcaccgatcccgaggaaggtgtgccgaagatc
atccagatgatcaaggagcggatgccgcgccggttcggccttgatccgatgaaggacatc
caggtgctctgtcccatgaaccggggtgtgctcggagcccgcaacctcaacatccagctt
caggaggtgctcaatcccaatccgcctgcgaaggtcgagcgcttcggttggcgcttctcg
ccgggagatcgcgtgatggaaacccagaacgactatgaccgggatgtgttcaatggcgac
ctcggcacagtggtgcggattgacgacgaggaaggagctttgatcgcctcgttcgatggg
cgagaagtgtcataccccttcggcgaactcgatacgctgatgccggcctatgccactacg
atccataagtcgcaaggctccgaatatcccgccgtcatcatcccggtcgtaacacagcac
ttcacgatgctggctcggaatctgctctacacaggcgtcacccgcggcaagcggttggtc
gttctggtgggccagaagaaagcagtcggaattgcagttagaggcgggcagatgaagagg
cgctggacgaaactgcgggagtggttagctgcccactga
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