Microvirga lotononidis: U0023_27635
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Entry
U0023_27635 CDS
T09656
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
mld
Microvirga lotononidis
Pathway
mld02020
Two-component system
mld02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U0023_27635 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
U0023_27635 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mld03021
]
U0023_27635 (rpoN)
Transcription machinery [BR:
mld03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
U0023_27635 (rpoN)
BRITE hierarchy
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
Motif
Other DBs
NCBI-ProteinID:
WQO30122
LinkDB
All DBs
Position
unnamed1:complement(830267..831706)
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AA seq
479 aa
AA seq
DB search
MRFSASQLQRQKQSLSITPQLIESIRLLQLTHAELRQFVEQEIEKNPLLELAPNDGGALG
DVLSTSAEDPHIGARENDVDEPTRTGAPEQPMQWKSTRDTTSIPPGQSLALGEFTASAET
LHDHVARQIALTAYTPQERLIARALSDHLEDTGYLQVDLLELAGSLNVREADVERVLRTL
QLFDPPGIFARTLSECLEIQLRQRDRFDPAIATLVANLEMLAQRDFQALKRHCGVGEDDL
LDMLHEIRALDPKPGNRFQSGGPESIIPDVWVQPSPGGGWQIELEPDTLPKLLINQTYFA
EVSRVTAHNSKDQAFLNDCFQNANWLIRSLDQRAKTILKVAAEIVRQQDAFFEHGIAHLR
PLNLRTVADAINMHESTISRVTSHKYMLTPRGVFELKYFFTVAIASSQGGDAHSAEAVRH
RIKAMVAVESPDDVLSDDDIVVRLKETGIDIARRTVAKYREAMNIPSSVQRRREKRLWA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtgagattctcagcaagccagcttcagcgtcagaagcaatctctgagtataacacctcaa
ctcattgagtcgatccgcttgctgcaactgacacatgccgagctgcgtcagttcgtggag
caggaaatcgagaagaacccgcttttggagctagcgccaaacgatggcggggctttaggc
gatgttttgtcgacttcggccgaggatccgcacatcggcgcacgcgaaaacgacgttgat
gagccgaccaggaccggggccccggaacagcccatgcaatggaaatcaacgcgcgacaca
accagtatcccgcccgggcaaagccttgccctcggcgagtttactgcctccgccgaaaca
ttgcacgaccatgtcgctcgtcagatcgccctcaccgcatacacaccgcaggagcggctg
attgctcgcgcgctttccgatcatctggaagacaccgggtaccttcaggtagaccttttg
gagctggccgggagcctaaatgtccgggaggctgatgtggaacgggttctcagaactttg
cagctctttgatccgccgggaatctttgcgcgtactctcagtgaatgcctcgagatacag
ttgcgccagcgagaccggttcgacccggcgatagcaactttggttgccaatcttgagatg
cttgcgcagcgcgattttcaggcattgaagcggcattgcggagtcggcgaagacgatctt
ctcgacatgctgcatgaaatccgtgcgctcgacccaaagccgggaaaccggtttcagtcc
ggaggcccggaatccatcattcccgacgtttgggtccaaccctcgcccggaggtggatgg
caaatcgaacttgagccagacacactgcccaagctgctgatcaaccaaacctatttcgcc
gaagtctcacgcgtgaccgcccataattcgaaagatcaggcatttctcaacgactgcttc
caaaacgcgaactggctaatccgcagcctcgatcagcgcgccaagacaatccttaaggta
gcggctgaaatcgtccgccagcaggatgccttttttgaacatggcatcgcccacctgcgg
cctctcaatctcagaactgtcgctgacgcgatcaacatgcacgagtcgacgataagccga
gtgacgtcgcacaagtacatgctcactccgcgcggcgtgttcgaactgaagtattttttc
actgtcgcaatcgcctcatcccaaggtggcgacgcgcactccgccgaggctgtccgccat
cggattaaggcgatggtcgccgtagaatcgcctgatgatgtgctgtccgacgatgacatc
gtcgtccgacttaaggaaactggcatcgatattgcgcgtcgcaccgtcgcaaagtatcgc
gaggcgatgaacatcccctcatccgtgcagcgccgccgggaaaagcgcttgtgggcctag
DBGET
integrated database retrieval system