KEGG   Microvirga lotononidis: U0023_27635
Entry
U0023_27635       CDS       T09656                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
mld  Microvirga lotononidis
Pathway
mld02020  Two-component system
mld02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:mld00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    U0023_27635 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    U0023_27635 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mld03021]
    U0023_27635 (rpoN)
Transcription machinery [BR:mld03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     U0023_27635 (rpoN)
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38
Other DBs
NCBI-ProteinID: WQO30122
LinkDB
Position
unnamed1:complement(830267..831706)
AA seq 479 aa
MRFSASQLQRQKQSLSITPQLIESIRLLQLTHAELRQFVEQEIEKNPLLELAPNDGGALG
DVLSTSAEDPHIGARENDVDEPTRTGAPEQPMQWKSTRDTTSIPPGQSLALGEFTASAET
LHDHVARQIALTAYTPQERLIARALSDHLEDTGYLQVDLLELAGSLNVREADVERVLRTL
QLFDPPGIFARTLSECLEIQLRQRDRFDPAIATLVANLEMLAQRDFQALKRHCGVGEDDL
LDMLHEIRALDPKPGNRFQSGGPESIIPDVWVQPSPGGGWQIELEPDTLPKLLINQTYFA
EVSRVTAHNSKDQAFLNDCFQNANWLIRSLDQRAKTILKVAAEIVRQQDAFFEHGIAHLR
PLNLRTVADAINMHESTISRVTSHKYMLTPRGVFELKYFFTVAIASSQGGDAHSAEAVRH
RIKAMVAVESPDDVLSDDDIVVRLKETGIDIARRTVAKYREAMNIPSSVQRRREKRLWA
NT seq 1440 nt   +upstreamnt  +downstreamnt
gtgagattctcagcaagccagcttcagcgtcagaagcaatctctgagtataacacctcaa
ctcattgagtcgatccgcttgctgcaactgacacatgccgagctgcgtcagttcgtggag
caggaaatcgagaagaacccgcttttggagctagcgccaaacgatggcggggctttaggc
gatgttttgtcgacttcggccgaggatccgcacatcggcgcacgcgaaaacgacgttgat
gagccgaccaggaccggggccccggaacagcccatgcaatggaaatcaacgcgcgacaca
accagtatcccgcccgggcaaagccttgccctcggcgagtttactgcctccgccgaaaca
ttgcacgaccatgtcgctcgtcagatcgccctcaccgcatacacaccgcaggagcggctg
attgctcgcgcgctttccgatcatctggaagacaccgggtaccttcaggtagaccttttg
gagctggccgggagcctaaatgtccgggaggctgatgtggaacgggttctcagaactttg
cagctctttgatccgccgggaatctttgcgcgtactctcagtgaatgcctcgagatacag
ttgcgccagcgagaccggttcgacccggcgatagcaactttggttgccaatcttgagatg
cttgcgcagcgcgattttcaggcattgaagcggcattgcggagtcggcgaagacgatctt
ctcgacatgctgcatgaaatccgtgcgctcgacccaaagccgggaaaccggtttcagtcc
ggaggcccggaatccatcattcccgacgtttgggtccaaccctcgcccggaggtggatgg
caaatcgaacttgagccagacacactgcccaagctgctgatcaaccaaacctatttcgcc
gaagtctcacgcgtgaccgcccataattcgaaagatcaggcatttctcaacgactgcttc
caaaacgcgaactggctaatccgcagcctcgatcagcgcgccaagacaatccttaaggta
gcggctgaaatcgtccgccagcaggatgccttttttgaacatggcatcgcccacctgcgg
cctctcaatctcagaactgtcgctgacgcgatcaacatgcacgagtcgacgataagccga
gtgacgtcgcacaagtacatgctcactccgcgcggcgtgttcgaactgaagtattttttc
actgtcgcaatcgcctcatcccaaggtggcgacgcgcactccgccgaggctgtccgccat
cggattaaggcgatggtcgccgtagaatcgcctgatgatgtgctgtccgacgatgacatc
gtcgtccgacttaaggaaactggcatcgatattgcgcgtcgcaccgtcgcaaagtatcgc
gaggcgatgaacatcccctcatccgtgcagcgccgccgggaaaagcgcttgtgggcctag

DBGET integrated database retrieval system