Microvirga lotononidis: U0023_29215
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Entry
U0023_29215 CDS
T09656
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
mld
Microvirga lotononidis
Pathway
mld02010
ABC transporters
mld02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mld00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
U0023_29215
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U0023_29215
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mld01002
]
U0023_29215
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mld02000
]
U0023_29215
Peptidases and inhibitors [BR:
mld01002
]
Cysteine peptidases
Family C39
U0023_29215
Transporters [BR:
mld02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
U0023_29215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_23
AAA_16
Peptidase_C39_2
RsgA_GTPase
AAA_30
Zeta_toxin
nSTAND1
AAA_25
F59B103_C
Motif
Other DBs
NCBI-ProteinID:
WQO30349
LinkDB
All DBs
Position
unnamed1:1119785..1121953
Genome browser
AA seq
722 aa
AA seq
DB search
MSSKVVKFKQRDITDCGAASLASVAAFYGYKLPLSRIRQYASTDRSGTNVLGLTEAAQKL
GFIAKGVKGDFDSLYKIPKPAIAHVIVKKVLRHFVVIQAVDARWVTVMDPAYGEIRKLSH
EEFKTQWTGVLVLLVPADTFKRRDETTSPLARFARLLAPHRAVMAQALVGALVTTILGLS
TAIYVQKIVDHVITAGNRNLLNLMSVAMLLILVAQILINLLRNRLVLQTGQKIDVYLILG
YYNHILSLPQKFFDSMRMGEIVSRMNDAVKIRSFLNDVLINMFVDVLMILFSFGLMFIYS
WKIALVMAVSTPLYLLVCWTINRLNRKRQRAIMENAADLEAQLVESLGAIFTIKTSGIES
FANFKIETRFIKMLHSVYSSGLISIFGDNASTFLATLFTIVLMWFGTTLTLDQTVTPGEL
LSCYTLLGYVTRPVTSLIQTNRIIQDAFIAADRLFEIFDVEQETSGGGIDATKSDLGDIR
LENVTFRHGPQLELFQDLSVTFRRGEMTAVVGESGSGKSTLASLLQNVYPLEGGRIRIGP
YALQNLSTVSLRKVVAVVPQSVDVFSGSVIENIALGEFEPDIEKILQICDQIGLRELIER
WPSGLQTYLGENGVHLSGGEKQRLALARALYRDPEILILDEATSSLDSIAEGFVLRVVED
LRWAGKTIVIIAHRLSTIRRADKIVVLDKGQVVEEGRHTDLLTADGAYARLWRAQTGALL
HG
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaaggtcgtcaagttcaagcagcgcgacatcacggattgcggagccgccagc
cttgcttccgtcgcagccttttacggttacaagctgccattatcgcgcatccgccagtat
gcctcgaccgaccgctccggcaccaacgtgctgggcctcacggaagcggcccagaagctg
ggcttcatcgccaagggggtgaagggtgacttcgacagcctgtacaagatcccgaagccc
gctatcgcgcacgtgatcgtcaagaaagtcctgcgccacttcgtcgtaatccaggcggtc
gatgcgaggtgggtcaccgtcatggacccagcctatggtgaaatccgcaagctgtcgcac
gaggagttcaagacgcaatggactggcgtcctggtgctcctggttccggcagacaccttc
aagcgccgcgacgagaccacctcgcccctcgcccgcttcgcccgtctgcttgcgccacac
agggcggtgatggcgcaggctcttgtcggggcgctggtgacgacgatcctcggtctctcg
acggccatctacgtccagaagatcgtcgatcatgtgatcacagcgggcaaccgcaacctg
ctcaacctgatgagcgtcgccatgctgctgatcctggtggcgcagatcctgatcaatctc
ctcaggaaccggctcgtcctgcaaacggggcagaagatcgatgtctacttaatcctcggc
tactacaatcacatcctaagtctgccccagaagttcttcgacagcatgcgcatgggcgaa
atcgtctcccgcatgaacgacgcagtgaagatcaggagcttcctgaacgacgtcttgatc
aacatgttcgtcgacgtgctaatgatcctgttctcgttcgggctgatgttcatctactcg
tggaagatcgccttagtcatggcggtctccaccccgctgtacctcttggtctgttggacc
atcaaccggctgaataggaaacgccagcgcgccattatggagaatgccgccgacctggag
gcgcaactggtggaatctctcggagctatcttcacgatcaagacctccggcatcgagagc
ttcgccaacttcaagatcgagacccgcttcatcaagatgctgcactccgtctacagttcc
ggcctcatctcgatctttggagacaatgcctcgactttcctcgcgaccctattcaccatt
gtgctgatgtggttcggaacaacgcttaccctcgatcaaaccgtcacgcccggcgagtta
ctgtcctgctacacgttgctcggctatgtcacccggccggttaccagcctgatccagacc
aaccggatcattcaggatgcctttatcgcggcggatcgcctgttcgagatcttcgacgtg
gagcaggagacaagcggcggcggcattgatgccaccaagtccgaccttggtgatatccgc
ctagagaacgtcacattccgccatggcccgcagcttgagctttttcaggatctcagcgtc
accttccgccggggcgagatgacagccgtggtgggggaaagcggctcgggcaagagcacc
cttgcgtctctgctgcagaatgtctacccccttgagggtgggcgcatccggatcggtcct
tatgccctccagaatctctcgaccgtatccctgcgcaaggttgtcgctgtggtgccgcaa
tcggtcgacgtgttctcgggctcggtgatcgagaacatcgcccttggcgagttcgagccg
gacatcgagaagatcctgcaaatctgtgatcaaatagggctacgggagctgatcgagcgc
tggcccagcggtctccagacctatctgggcgagaatggtgtacacctctccggcggcgag
aagcagcgccttgccttggctcgggctctgtaccgggatccggagatcctgatcctcgac
gaggcgacctcctctctcgactcgatcgccgaggggtttgtcctgcgggtggttgaggat
ctgcgttgggccggtaagaccatcgtcatcatcgctcatcgactcagcaccattcgtagg
gccgacaagatcgtggtcctcgacaaggggcaggttgttgaggagggaaggcatactgat
ctgctgacagctgatggcgcttatgctcgcttgtggcgggcgcaaaccggcgccttgttg
cacggatga
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