KEGG   Microvirga lotononidis: U0023_31190
Entry
U0023_31190       CDS       T09656                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
mld  Microvirga lotononidis
Pathway
mld02024  Quorum sensing
mld03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mld00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    U0023_31190 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    U0023_31190 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mld03019]
    U0023_31190 (hfq)
   03036 Chromosome and associated proteins [BR:mld03036]
    U0023_31190 (hfq)
Messenger RNA biogenesis [BR:mld03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     U0023_31190 (hfq)
Chromosome and associated proteins [BR:mld03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    U0023_31190 (hfq)
SSDB
Motif
Pfam: Hfq
Other DBs
NCBI-ProteinID: WQO31817
LinkDB
Position
unnamed2:316300..316584
AA seq 94 aa
MTAKSTSPLQDTLLQHLRDGNIEVTMFLVNGIRLLGWIKRFDSFTVQLVRGSSSQVVYKH
AISTILPAEPIPLFVPEAESDDDRSHPDLEHKVQ
NT seq 285 nt   +upstreamnt  +downstreamnt
gtgaccgcaaaaagcacctcacccctgcaggatacgctcctccagcacctgcgcgacggc
aacatcgaggtgacgatgttcctcgtgaacgggatcaggcttctgggctggatcaaacgg
tttgacagcttcacggttcagcttgtgcgaggcagcagctcgcaggtcgtctacaagcat
gccatttcgaccattctcccggcagagccgatccccctgtttgttccggaagccgagagt
gacgatgatcggtcacacccggatctggaacacaaggtacaataa

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