Entry |
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Name |
(GenBank) possible ribonuclease
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KO |
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Organism |
mle Mycobacterium leprae TN
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:mle00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ML1468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mle03019]
ML1468
03009 Ribosome biogenesis [BR:mle03009]
ML1468
Enzymes [BR:mle01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ML1468
Messenger RNA biogenesis [BR:mle03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ML1468
Ribosome biogenesis [BR:mle03009]
Prokaryotic type
rRNA processing factors
ML1468
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(1765041..1767815)
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AA seq |
924 aa
MIDGAPPLEPSKEPTQHMELPDRLRVHSLARTLGTTSRRVLDVLSALDGRIRSAHSSVDR
VDAVRVRDLLASQPNSPHELTAVPDNPVALEERDSRLVLETTVERPHYMPLFVAPQPIEV
DDDSCADDDVESGDDSDVGDDEEQPDRPANRRRRRGRRGRGRGRGEQGGSDVQSDDVDGA
VDSTESEDFDGQDFDESEDTEIGYDESGSSEAGNRRRRRRRRRKSGVGEDEGCAPDDPPN
TVVHERTPRAAGRSASFDNGVNGTGSADIKGIDGSTRLEAKRQRRRDGRDAGRRRSSVLS
EAEFLARRESVERVMVVRDRIRTEPPHPGARYTQIAVLEDGIVVEHFVTSAASASLVGNI
YLGIVQNVLPSMEAAFVDIGRGRNGVLYAGEVNWEAAGLGGADRKIEQALKPGDYIVVQV
NKDPVGHKGARLTTQVSLAGRYLVYVPGASSTGISRKLPDTERQRLKEILREVVPPDAGV
IIRTASEGVKEEDIRKDVTRLQEHWEQIEAKTIQTKEKAAGAAVALYEEPDVLVKVIRDL
FNDDFSGLVVSGDEAWNTINEYVNSVAPELVSKLTKYDPPIGPDGQHGPDVFAVHRIDEQ
LAKAMDRKVWLPSGGTLVIDRTEAMTVIDVNTGKFTGSGGNLEQTVTKNNLEAAEEIVRQ
LRLRDIGGIVVIDFIDMVLESNRDLVLRRLTEVLARDRTRHQVSEVTSLGLVQLTRKRLG
TGLVEAFSTSCPNCTGRGILLHTDPANSTPMVGRKSESGGRRSKRSKKNRSDETAVVKVP
VHAPGEHPMFKAMAAGSSSVVVGGEDESNESGTELTGKIDEPLEEQAVAGLDDVDQEDFD
TDEEDDLDDDEELDDEEDLGDDDEELDLDDDLDVDEDESDSEADLDSADVLDRSTLLIRN
RSGFARPRRRRAAGRPAGPPIHVD |
NT seq |
2775 nt +upstreamnt +downstreamnt
gtgatagacggtgcacccccgttagagccatcaaaagagccgacgcagcatatggaactg
ccggaccgcttgagagtccattcgctagcacgaacgttgggaaccaccagcagacgagtg
ttggacgtgctgagcgctctcgacggccggatccgtagcgcacattccagtgtcgaccgc
gtcgacgcggtccgggtccgtgatctgctggccagccaacccaactcacctcatgaactc
actgccgtacctgataaccctgtcgcgctcgaagagcgcgactctcggctggtgctagaa
accacagtagagcggccgcactacatgccgttgttcgttgcgccacagccgatagaggtc
gatgatgactcctgcgctgacgatgatgtggaatccggtgacgactccgacgttggcgac
gacgaagagcaacccgatcgaccggcgaaccgtcgtcggcgtcgtggccgtcggggtcgt
ggtcggggccgcggtgagcagggtggatccgacgtccagagcgacgatgtcgacggcgcg
gtcgactcaaccgagtctgaggacttcgatggccaagatttcgacgagtccgaagacacc
gaaatcggttacgacgagagtgggtcctctgaagccggcaaccgccgccgccgtcggcgc
cgacgtcgtaagtcgggggtaggtgaagacgaggggtgcgcgcccgacgatccgccgaac
acggttgtgcacgaacggacaccccgtgcggctggtcggtctgctagttttgacaacggc
gtcaacggcacgggcagcgccgatatcaagggtatcgacggttcgactcgactggaggcc
aagcggcaacgccgccgagacgggcgcgacgccgggcggcgccgttcatcagtgttgagc
gaggccgaattcctggctcggcgcgagtccgtcgagcgggtcatggtggtgcgcgatcgg
atccgcactgagccgccccaccctggcgctcgatacacccagatcgcggtgctcgaagac
ggcatcgtcgtcgagcacttcgtgacgtcggcagcatctgcttccctggtcggcaacatc
tacctcggtatcgtgcagaacgtgctgccgtcgatggaggcggccttcgttgacatcggt
cgcggtcgcaacggcgtgctttatgccggagaagtaaactgggaagcggccggattgggc
ggggccgatcgcaagattgaacaggccctcaaacccggcgactatatcgttgtccaggtc
aacaaggacccggtcgggcacaaaggggcgcgacttaccacgcaagtgtctttggccggt
cgttacctggtttacgtcccaggggcgtcgtcgaccgggatcagccgtaagctgcctgac
accgaacgccagcgcctcaaggagatcctgcgtgaggtagtgccacccgatgcgggcgtg
atcatccgcactgcgtcagagggcgtcaaagaggaagacatccgcaaggatgtcacccgc
ctgcaggagcactgggaacagatcgaagccaagacaatccagaccaaggaaaaggccgct
ggcgctgcggtggccctttatgaggaaccggatgtgttggtcaaagtcatccgcgacttg
ttcaatgacgacttctcgggcctcgtcgtctccggcgacgaggcatggaataccatcaat
gagtatgtgaattctgttgctcccgaacttgtttcgaagttgacaaagtatgacccgcca
atcggtccggacgggcagcacgggccagatgtcttcgcggtacatcgcatcgacgagcaa
ttggccaaggcaatggaccggaaagtgtggctgccatcgggcggtacactggtgattgac
cggactgaggcgatgacggtgatcgacgtcaatactggcaagttcaccgggtctgggggt
aacctcgagcagacagtcaccaagaataatcttgaggcagctgaggagatcgtgcgccag
ctgcggctgcgtgatattggcggcatcgtggtcatcgacttcatcgatatggtgctcgag
tccaaccgcgacttggtgttgcgtcgactgactgaggtgcttgctcgcgaccgcactcgt
caccaggtgtccgaggtgacgtctttggggctggtgcaattgacccgcaaacggttgggc
accgggctggtcgaggcgttctcgacatcgtgtccgaactgcacaggtcgcggtatcctg
ctgcacaccgacccagctaattcgaccccgatggttggacgcaagtccgagtcaggcggt
cggcgaagtaagcgatcgaaaaagaaccgatcggacgagaccgctgtggttaaagtaccg
gtgcatgctccgggcgagcatccgatgtttaaggcgatggccgcgggctcgtcctcggtg
gttgttggtggcgaggacgaatccaacgagtctggtacagaactcaccgggaagatcgac
gagccgctcgaagagcaggctgttgctggcctagatgatgttgaccaggaagatttcgac
accgacgaagaagacgacctcgacgatgacgaggagctcgacgacgaggaagaccttggc
gacgatgacgaggaactcgatttagacgacgatcttgacgttgacgaagacgagtctgac
tccgaggccgacctcgacagcgctgacgtgcttgaccgctccactctcctgatcagaaac
agatcaggttttgcccgtccgcgacggcggcgcgcagcgggtcgtccggccgggccgccg
atccacgtggactga |