Mycobacterium leprae TN: ML1890
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Entry
ML1890 CDS
T00047
Symbol
rpoC
Name
(GenBank) [beta]' subunit of RNA polymerase
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mle
Mycobacterium leprae TN
Pathway
mle03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mle00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ML1890 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mle03021
]
ML1890 (rpoC)
03400 DNA repair and recombination proteins [BR:
mle03400
]
ML1890 (rpoC)
Enzymes [BR:
mle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ML1890 (rpoC)
Transcription machinery [BR:
mle03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ML1890 (rpoC)
DNA repair and recombination proteins [BR:
mle03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ML1890 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
CAC30844
Pasteur:
ML1890
UniProt:
P30761
LinkDB
All DBs
Position
complement(2269270..2273220)
Genome browser
AA seq
1316 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRQWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITTVDEEMRHNELSTLEAEMMVERKSVEDQRDADLEARAQKLEAD
LAALEAEGAKADARRKFRDGGEREMRQLRERAQRELDRLEDIWSTFTKLAPKQLIVDENL
YRELVDRYGEYFTGAMGAESIQKLMQDFDIEAEAESLREVIRNGKGQKKLRALKRLKVVA
AFQQSGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPDIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPMLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLTTAVDGDTGAYR
PAAEDRPESGVYSSPAEAIMAADRGVLSVRAKIKVQLTQVRPPADIEARWFGANGWRPGD
PWIADTTLGRVMFNELLPLGYPFVNKQMHKKVQAAIINDLAERYPMIVVAQTVDKLKDAG
FYWATRSGVTVSMADVLVPPRKKEILDHYEERADKVEKQFQRGALNHDERNEALVEIWKE
ATDEVGQALRDHYPVDNPIITIVDSGATGNFTQTRALAGMKGLVTNPKGEFIPRPVKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCQTERGIVVE
LAVRVPDGSLIRELYIETSAYARTLGANAVDEAGNVIVARGEDLGDPEIDALLAAGITQV
KVRSVLTCTTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV
GEDITGGLPRVQELFEARVPRGKAPIADVTGRVRLEDGERFYKITIVPDDGGEEVVYDKL
SKRQRLRVFKHADGSERVLSDGDYVEVGQQLMEGSADPHEVLRVQGPREVQIHLVREVQE
VYRAQGVSIHDKHIEVIVRQMLRRVTIIDSGSTEFLPGSLIDRAEFESENRRVVAESGEP
AAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLNGLKENVIIGKLIPA
GTGINRYRNIQVQPTEEARASAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccgcattggcctggctaccgcggaggacatt
cgtcaatggtcttacggcgaggttaagaagccagagaccatcaactatcgtacgctcaaa
cctgagaaggatggcctgttctgtgagaagatcttcggacctactcgcgactgggagtgc
tactgcggcaaatacaagcgggtgcgtttcaagggtatcatctgtgagcgttgtggcgtc
gaggtgactcgcgccaaggtgcgtcgtgagcggatgggccatatcgagctggccgcacct
gtcacgcacatctggtacttcaaaggtgtaccgtcgcgcctgggctatctgctcgacctg
gccccgaaggaccttgagaagattatctacttcgccgcgtacgtgatcaccacggtcgat
gaggagatgcggcacaacgagctgtcgacgctcgaggctgaaatgatggtggagcgcaag
tctgttgaggatcagcgcgatgccgacctggaagctcgtgctcagaaattagaggccgac
ttggctgcgctggaggctgagggtgccaaggcagacgccaggcgtaagttccgggatggc
ggtgagcgcgagatgcgccagctccgtgagcgtgcgcagcgtgagctggatcgtttagaa
gatatctggagcacctttaccaagctggctcccaagcagctgatcgttgacgaaaatctc
tatcgtgaattggtcgaccgttatggcgaatacttcactggcgccatgggtgcggagtct
attcagaagttgatgcaggactttgacatcgaggccgaggctgagtcgctgcgtgaagtg
attcgaaacggtaaggggcaaaagaagcttcgggcgctaaagcgactgaaggtagtcgct
gccttccaacagtcaggcaactcgccaatgggcatggtgctcgacgctgtcccggtcata
ccgccggaactgcgcccgatggtgcagctcgacggtggccggtttgccacgtccgacttg
aacgacctgtaccgccgggtgatcaaccgtaacaaccggctgaaaaggttaatcgatctg
ggtgcgcccgatatcattgtcaacaacgagaagcggatgctgcaggagtctgtggacgcg
ctgttcgacaatggacgccggggaagacctgttacggggccgggcaaccgtccactgaag
tcgctgtctgatctgctcaagggcaagcaaggccggtttcggcagaacctgcttggtaag
cgtgttgattactcgggccgtagcgtcatcgtggtcggcccgcagctcaagttgcaccag
tgtggattgcccaagctgatggcgctggagctgttcaagccgttcgtgatgaagcggttg
gttgatctcaatcacgcgcaaaacatcaagagcgccaagcgaatggtggagcggcagcgg
cctcaggtgtgggatgtgctcgaagaggtcatcgcggagcatccggtgctgctgaaccgt
gcgcccaccctgcaccgactgggtatccaagctttcgagccgatgcttgtggaaggcaag
gctattcagctgcatccgttggtgtgtgaggcgttcaacgccgacttcgacggtgatcag
atggcggtgcatctgcctctgagtgccgaagcgcaggccgaggcccgcattctgatgctg
tcgagtaacaacatcttgtcacccgcctccggccgcccactggctatgccgcgactggac
atggtgactggactatattaccttaccaccgcggtcgacggcgacactggcgcctaccgg
ccggcagccgaggatcgtccagagtcgggtgtgtactcttctccggccgaagcgattatg
gcggccgaccgcggggtgctttcggtgcgggctaagatcaaagtccagttaactcaggtg
cgtccgccggccgacatcgaggctagatggttcggcgccaatggttggcgtccaggagat
ccgtggatagccgataccacgctgggtcgggtgatgttcaacgaactactgccgctgggc
tatccgtttgttaacaagcagatgcataagaaagtgcaggccgctatcatcaacgactta
gccgagcgctacccgatgatagtcgtcgcgcagactgtcgacaagctcaaggacgccggt
ttctactgggcgacccgcagcggcgttacggtctcgatggctgacgtgttggttccgccg
cgtaagaaggagatcctcgaccactacgaggagcgtgccgacaaagtcgaaaagcagttc
caacgtggcgctttgaaccacgacgaacgcaatgaggcgctggtggagatctggaaagaa
gccaccgacgaggtcggtcaggcgctgcgggaccactacccggtcgacaacccgatcatc
acaatcgttgattccggtgccacgggtaacttcacccaaacccgggcgctggccggcatg
aagggtttggtgaccaaccctaagggtgagttcattccgcgcccggtcaagtcatcgttc
cgcgagggtctgactgtgttggagtacttcatcaacacccatggtgctcgaaagggcttg
gctgacaccgcgttgcgtaccgccgactcggggtacctgacccgtcgtctggtggacgtg
tcgcaagacgtcatcgtccgcgaacacgactgccagactgagcgcggcattgtcgttgag
ctggccgtgcgtgtgcccgatggcagcctgatccgcgagctgtacatcgaaacgtcggca
tacgcaaggactttgggcgccaacgcggtcgacgaagctggcaacgtgatcgtcgcgcgt
ggtgaggacctgggtgacccggagatcgatgccttgctggcggcgggcatcacgcaggtc
aaggtgcgctcagtgctgacctgtaccaccggcaccggtgtatgcgctacatgctacggg
cgttcgatggctaccggcaagctggtcgacatcggtgaggccgtcggtattgtcgcggcc
cagtccatcggtgagcccggcacgcagctgaccatgcgtaccttccaccaaggcggtgtc
ggtgaggacatcaccggtggtttgcctcgggttcaggagctgttcgaggcccgggtgccg
cgtggcaaggcgccgattgccgacgttactgggcgagtccgtctcgaggacggtgaacgc
ttctacaagatcactattgttcccgacgacggtggagaagaagtcgtctacgataagctt
tccaagcgccaacggctgcgggtgttcaagcacgcagacggttccgagcgagtgctttcc
gacggtgactacgtcgaggtgggtcagcagttgatggaaggttccgctgacccgcacgag
gtgctgcgcgtgcaaggccctcgcgaggtgcagatccatctggtgcgcgaggttcaagag
gtgtaccgtgcgcagggtgtgtcgatccacgacaagcacatcgaggtgatcgttcgccag
atgctgcgccgggtcaccatcatcgactcgggttcgacggaattcctgcccggctcgttg
atcgaccgtgcggagttcgagtcggagaatcgtcgggtggtggccgagagtggcgagccc
gctgccggccgtccggtgctgatgggtatcaccaaggcgtcgttggccaccgactcgtgg
ttgtctgcggcgtcgttccaggagacgacgcgggtgttgaccgatgcggcgatcaactgc
cgcagcgataagctcaacggtcttaaggagaacgtgatcatcggaaagttgatcccggcc
ggtaccggtattaaccggtaccgcaacatccaggtgcagcccaccgaggaggcccgcgcc
tcggcgtacacgattccatcctacgaggatcagtactacagtccggacttcggccaggcc
accggtgctgccgttccactggacgactacggctacagcgactaccgttag
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