Mammaliicoccus lentus: H3V22_00880
Help
Entry
H3V22_00880 CDS
T07021
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mlen
Mammaliicoccus lentus
Brite
KEGG Orthology (KO) [BR:
mlen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlen03016
]
H3V22_00880 (truB)
Enzymes [BR:
mlen01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
H3V22_00880 (truB)
Transfer RNA biogenesis [BR:
mlen03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H3V22_00880 (truB)
Prokaryotic type
H3V22_00880 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QMU10819
LinkDB
All DBs
Position
189458..190366
Genome browser
AA seq
302 aa
AA seq
DB search
MDGILAIHKEVGMTSHDVVFKLRKILKTKKVGHTGTLDPEVSGVLPICVGKATRVSDYVM
KSGKTYIAEVTIGKSTTTEDQTGEIVEEKAVTENIWCTDDIRSTLNKLVGEIEQIPPMYS
AVKVNGKKLYEYARQNIEVERPVRKVFINSIELTSDISYDNQTCKFEIEVECGKGTYIRT
LATQIGELLGYPAHMSHLVRLKSGGFSLNQSITLDNLREIVEQDRLQEVLLPLEYGLNGL
QKIIVEDSGLVKRIQNGQKIMKTDLNTNIDGEFVLWYKEHAIAIMEPYEKNNDLYKPKKV
FL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
ttggatggcatattagcaattcataaagaagtaggcatgacgagtcacgatgtcgtgttt
aaacttcgaaaaatattaaaaactaaaaaagttggtcatactggcactttagatccagaa
gtaagtggtgttttaccaatatgcgtaggtaaagctactcgtgtcagtgattatgttatg
aaaagtggtaagacatatattgctgaagtaacaattggtaagagcacgactactgaagat
caaactggagaaatagtagaagaaaaagctgtaactgaaaatatttggtgtactgatgac
atacgttcaactttaaataaattagtgggtgaaattgagcaaattccgccgatgtattca
gctgttaaagtaaacggaaaaaaattatatgaatacgctcgtcaaaatattgaagttgaa
agacctgttcgtaaagtcttcattaacagtattgagctaacttcagacatttcatatgac
aaccaaacttgtaaatttgaaatagaagtcgagtgtggaaaagggacatatataagaaca
ttagcaactcagataggagaattacttggttatcctgcacatatgtctcatttagttaga
ttgaaaagtggtggattttcgttaaatcagtctattacattagataacttacgtgaaata
gttgagcaagataggttacaggaagtgcttcttccattagaatatggattgaatggctta
caaaaaataatcgtagaagattctggtcttgttaaaaggatacaaaatggacagaagatt
atgaaaaccgatttaaatactaatatagacggtgaatttgtcctatggtataaagaacat
gcaatagcgattatggagccttatgaaaaaaataatgatttatataaaccaaaaaaagtt
tttctttaa
DBGET
integrated database retrieval system
