Mammaliicoccus lentus: H3V22_00895
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Entry
H3V22_00895 CDS
T07021
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mlen
Mammaliicoccus lentus
Pathway
mlen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H3V22_00895 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlen03019
]
H3V22_00895 (pnp)
03016 Transfer RNA biogenesis [BR:
mlen03016
]
H3V22_00895 (pnp)
Enzymes [BR:
mlen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H3V22_00895 (pnp)
Messenger RNA biogenesis [BR:
mlen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H3V22_00895 (pnp)
Transfer RNA biogenesis [BR:
mlen03016
]
Prokaryotic type
tRNA degradation factors
H3V22_00895 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
OB_RRP5_4th
SPATA25
S1_2
Motif
Other DBs
NCBI-ProteinID:
QMU10822
LinkDB
All DBs
Position
191830..193944
Genome browser
AA seq
704 aa
AA seq
DB search
MSQEKKVFKTEWAGSPLIIETGQLAKQANGAVLVRYGDTVVLSTATASREPRNVDFFPLM
VNYEEKMYAAGKIPGGFNKREGRPGEDATLTSRLIDRPIRPLFPKGYRHDVQVISIVMSV
DPNCSPEMAAMIGSSMALSVSDIPFERPIAGVNVGLVDGEYVINPDVEAKEVSLLDLQVA
GHKDAINMVEAGAKEVSEETMLEGILFGHKEIQRLVEFQEAIIDEIQPEKSPFEPVEVEQ
SLEEAVIQKAEALDLNGAIRTEEKQQRDINITAVKDEVLVHFTNEEEPDNEEVLKDVSKI
LDTLVKDEVRRLITEDKVRPDGRKPEEIRPLASEVGLLPRAHGSGLFTRGQTQAFSVATL
GALGEHQIIDGLGTEDQKRYMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALLQVIP
DEKEFPYTIRVVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLITKDDNYT
ILSDIQGMEDALGDMDFKVAGTEKGITAIQMDIKIDGLSEQILKEALEQARIGRLHILNH
MLETLGQPREDLSEYAPKIEIMHIKPDKIRDVIGPGGKKINEIIDETGVKLDIEQDGTVF
IGSKDQEMIDRARKIIEDITREAEVGAIYMATVKRIEKFGAFVEIFPGKDALVHISQFSN
DRVNKVEDVAKIGDQFLVKVTEIDRQGRVNASRKVLLNEDKEQK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagagaaaaaagtctttaagacagaatgggcaggaagtccattaataatagaa
acaggtcagttagcgaaacaagctaacggtgcagtgttagtaagatatggggatacggtt
gtattatcaactgctacagcttctagagagcctagaaacgtagatttcttcccattaatg
gtgaattatgaagaaaaaatgtatgcagctgggaaaataccaggcggttttaacaaacgt
gaaggaagaccaggggaagatgcaactttaacgagtcgtttaattgatagaccaattaga
ccactatttccaaaaggttatagacatgacgttcaagttatttctatcgtgatgagtgtt
gacccaaattgttcacctgaaatggcggcaatgatcggatcgtcaatggcattatctgtt
tcagatataccatttgaaagaccaattgcaggtgttaatgttggtttagtagatggtgaa
tatgtcattaaccctgacgtagaagctaaagaagtttcattattagatttacaagtagca
ggtcataaagatgctattaacatggtagaagctggtgcgaaagaagtatctgaagaaacg
atgttagaaggcattttatttggtcataaagaaattcaaagattagtagaattccaagaa
gctataattgatgaaattcaacctgagaaatctccatttgaacctgttgaagttgagcaa
tctcttgaagaagctgtaatccaaaaagccgaggcattagatttaaacggcgcaattaga
acagaagaaaaacaacaacgtgatatcaatataactgctgttaaagatgaagtattggta
cactttactaacgaagaagagcctgataacgaagaagttcttaaagatgttagtaaaata
cttgatacattagtgaaagacgaagtacgtcgtttaatcactgaagataaagtaagacca
gacggacgtaaacctgaagagattagaccgttagcatctgaagttggcttattacctaga
gcacatggttcaggtttatttacacgtggccaaactcaagcattctctgtagcaacatta
ggtgcattaggtgaacatcaaatcatagatggattaggtactgaagatcaaaaacgttac
atgcatcattataatttccctaatttctctgtaggtgaaactggtccagtaagagcgcca
ggtcgtcgtgaaattggtcatggtgcactaggtgaacgtgctttattacaagtgattcct
gatgaaaaagaattcccatatacaattagagttgtatctgaagtattagaatctaatggt
tcatcatcacaagcatcaatttgtggttctacacttgcacttatggatgctggtgtacca
attaaagcgccagttgctggtatagcgatgggattaatcactaaagatgataactatact
attctttctgacatacaaggtatggaagatgctttaggcgatatggactttaaagttgct
ggaactgaaaaaggtattacagcgatacaaatggacattaaaattgatggattaagtgaa
caaatcttaaaagaagctttagaacaagctagaattggtagattacacatcttaaatcat
atgttagaaacattaggtcaacctcgtgaagatttaagcgagtatgcacctaagattgaa
ataatgcatattaaaccagataaaataagagatgttattggacctggtggtaagaaaatt
aatgaaatcatcgatgaaacgggtgttaaattagatatcgagcaagatggaacggtattt
ataggttctaaagatcaagaaatgatcgatagagcacgcaagattatcgaagatattact
agagaagcagaagttggcgcaatatacatggcaactgttaagagaattgaaaaattcggc
gcatttgttgaaatattccctggtaaagacgcgcttgttcatatctctcaattttcaaat
gatcgagtgaataaagttgaagatgtagctaaaattggagatcagttcttagtaaaagta
actgaaatcgaccgccaaggacgtgtcaatgcttcacgtaaagtattattgaacgaagat
aaagagcaaaaataa
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