Mammaliicoccus lentus: H3V22_03500
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Entry
H3V22_03500 CDS
T07021
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mlen
Mammaliicoccus lentus
Pathway
mlen03030
DNA replication
mlen03410
Base excision repair
mlen03420
Nucleotide excision repair
mlen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H3V22_03500 (polA)
03410 Base excision repair
H3V22_03500 (polA)
03420 Nucleotide excision repair
H3V22_03500 (polA)
03440 Homologous recombination
H3V22_03500 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlen03032
]
H3V22_03500 (polA)
03400 DNA repair and recombination proteins [BR:
mlen03400
]
H3V22_03500 (polA)
Enzymes [BR:
mlen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H3V22_03500 (polA)
DNA replication proteins [BR:
mlen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H3V22_03500 (polA)
DNA repair and recombination proteins [BR:
mlen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
H3V22_03500 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H3V22_03500 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH
DUF3913
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QMU11300
LinkDB
All DBs
Position
complement(700518..703142)
Genome browser
AA seq
874 aa
AA seq
DB search
MEKLVLIDGNSLSFRAFFALPLLTNKAGVYTNAIYGFTMILDKIIKEEQPTHFMVAFDAG
KTTFRNNMYSEYKGGREKTPDELRSQLPYIRQLVESYNIKHYELENYEADDIIGTLSKQA
DNQNLKTIIITGDRDLTQLASENVTIYYTKKGVTDIDHYTPEFIAEKYDGIVPNQIIDMK
GLMGDKSDNIPGVPGIGEKTAIKLLKQFETVEGVYENIDELKKSKMKEKLIENEENAKLS
KDLATINRDSPIEVTIDDLKLTDYSDEEKIKLFKTLEFKQLLDQMDASTEASDDRVIEYI
DSMDDFDFKNTKEASIHFETNENNYLKADVLGFAIQTENQVFVITEEEFKQNKDLHEWLE
REEVSLSAYDVKKTIVLSHRLGVKIKGVTFDTMLASYILDPSRTIDDVYSVVSEFGIYYV
PNDESIYGKGKKLHVPERDVLFECIAKKVTAISESKEKMIDLLKEREQLSLHDDLELPLA
TVLADMERLGITVDKDTLVNMQEDLNSRLEKLIEQIHNYAGSEFNINSPKQLGVVLFEDL
KLPIIKKTKTGYSTAVDVLEQLRNEHPIIEDILVYRQLSKLQSTYIEGLQKMITPEGKIH
TRFNQTLAQTGRLSSVEPNLQNIPIRLEEGRKIRKAFRPSKKDHVIFAADYSQIELRVLA
HITGDEHMKEAFTSNEDIHTKTAMRVFNINSKDEITGNMRRQAKAVNFGIVYGISDYGLS
QSLGITRKEAKKFIDDYLDSFPKVKEYMDTIVQDAKQKGYVETLLHRRRYTPDITNRNFN
LRSFAERTAMNTPIQGSAADIIKLAMVQFAHKIKDTNFNAKLLLQVHDELIFEVPNDEID
EFRPFVEEIMDNALELSVPLSVESSYGDTWYDAK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaattggtacttatagacggaaatagtttatcatttagagctttttttgcattg
cctcttttaactaataaagcgggcgtatacacaaatgcaatttatggtttcacaatgatt
ttagataaaataataaaagaagaacaaccgactcattttatggttgcatttgatgctgga
aaaacaacatttagaaataacatgtatagtgaatacaaaggtggacgtgaaaaaacgccg
gatgaattacgtagccaattgccatatattcgtcaattagttgaaagttataatattaaa
cactatgaacttgaaaattatgaagcggacgatattatcggtacgctatcaaaacaagct
gataatcaaaatttaaaaactataattataactggcgatcgtgatttaacacaattagct
agcgaaaacgtaacaatttattacactaaaaaaggtgtgacagatattgatcactataca
cctgaattcatcgctgaaaagtatgatggaatagtaccaaatcaaattattgatatgaaa
ggccttatgggagataaatcagataatataccaggtgtccctggtattggtgaaaagact
gctatcaagttattgaaacaatttgaaacagttgagggcgtttacgaaaatatagatgaa
ttaaaaaaatctaaaatgaaagaaaagctaattgaaaatgaagaaaatgcaaaattaagt
aaagatttagcgacgattaatagagatagccctatagaagtaacgatagatgatttaaaa
ttaacagactatagtgatgaagagaaaattaaactattcaaaactttagaatttaaacaa
ttgttagatcaaatggatgcaagtacagaagcttcagatgatcgtgttattgaatatata
gatagtatggatgattttgattttaaaaatacaaaagaagcgtccatacattttgagacg
aatgaaaacaattatctaaaagcagacgttctaggtttcgctattcaaacggaaaatcag
gtatttgtgataacagaagaagaatttaaacaaaataaagatttgcatgaatggttagaa
cgagaagaggtatcattgtctgcttatgacgttaaaaagactattgtgttatcacataga
ttaggtgtaaaaattaaaggtgttacatttgatacaatgttagcgagttatatattagat
ccttctagaacaatagatgatgtatattcagtcgtgtctgaatttggaatttattacgtg
cctaatgacgaaagcatctatggaaaaggcaaaaagttacacgtgccagaaagagacgtt
ttatttgaatgtatcgcaaaaaaagtgactgcgatttcagaatcaaaagaaaaaatgatt
gacctattaaaagaaagagaacaactttcattacacgatgatttagagttgccactagcg
acagttttagctgatatggagagattaggtataacagttgataaggatactttagtaaat
atgcaagaagatttaaattcaagacttgagaaattaattgaacaaattcataattatgcg
ggttctgaattcaatattaattcacctaagcaacttggtgtagtattatttgaagattta
aaattaccaatcattaaaaagactaagactggctattcaacagcagtagatgtgttagaa
caattacgaaatgaacatcctataattgaagatattttagtttatagacaattatctaaa
ttgcaatctacttacattgaaggcctacaaaaaatgattacacctgaaggtaagattcat
acgcgatttaaccaaacattggcacaaactggtcgcttaagttctgttgaacctaacttg
caaaacataccgattcgattagaagaaggtcgtaaaattagaaaagcatttagaccaagt
aagaaagaccatgttatttttgcagctgactattctcaaattgagttacgtgtattggca
catattacaggggacgaacatatgaaagaagcatttacatctaatgaagatattcatacg
aaaactgcaatgcgtgttttcaacataaatagtaaagacgaaattactggaaatatgaga
agacaagctaaagctgttaactttggtatcgtttatggaatcagtgattatgggttgagt
caaagtttaggtattacgagaaaagaagctaagaaatttatcgatgactatttagatagt
ttccctaaagtaaaagaatatatggatacaatagtgcaagatgcaaaacaaaaaggatat
gtagaaacacttcttcatagaagacgatatacgcctgatattacaaatagaaactttaat
ttaagaagctttgcagaaagaacagctatgaatacacctatacaaggtagtgcagctgat
atcatcaaacttgcaatggttcagtttgctcataaaattaaagatacaaactttaatgca
aaattattattacaagttcacgatgaattaatatttgaagtaccaaatgatgaaatagat
gaatttaggccatttgtagaggaaatcatggataatgcgcttgaactgagcgtaccatta
agtgttgaatcaagttatggagacacatggtatgatgcaaaataa
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