Mammaliicoccus lentus: H3V22_03565
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Entry
H3V22_03565 CDS
T07021
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mlen
Mammaliicoccus lentus
Pathway
mlen03030
DNA replication
mlen03430
Mismatch repair
mlen03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H3V22_03565
03430 Mismatch repair
H3V22_03565
03440 Homologous recombination
H3V22_03565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlen03032
]
H3V22_03565
03400 DNA repair and recombination proteins [BR:
mlen03400
]
H3V22_03565
Enzymes [BR:
mlen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H3V22_03565
DNA replication proteins [BR:
mlen03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H3V22_03565
DNA repair and recombination proteins [BR:
mlen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H3V22_03565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QMU11312
LinkDB
All DBs
Position
complement(718031..721222)
Genome browser
AA seq
1063 aa
AA seq
DB search
MVSHLNIHSSFDLLNSSLRIPDVIKKAKNENYQALAITDLNVMYGALQFYDECLKQGIKP
IFGLTIYLDDQLNELECVLLAKNQTGYQNLVKLSSAISLKERHSTPIEWLNTYSEGLIII
GKNLNIDNEHLFHSIKISDQDKYISHDSSVEENYKKVYMQSALYLNDEDSDSLIALNTIK
NNEKLTISDFNTHLNQHFLTMEELSQIDVSSKFIKTTDEIAEKCNVQIQYHQDLLPKYVT
PNGKDSDTYLWELLMNNKSNFPQFNDTYAERLKYEYDIIVSMGYSDYFLIVSDLINYAKS
NDVLVGPGRGSSGGSLVSYILNITTLDPIEYDLLFERFLNPERVTMPDIDIDFQDTKRDK
VIQYVQEKYGDNRVAGIVTYGHLLARAVARDVGRILQFDEPTLNYISKLIPHKLGITLDE
AYESDEFKQFVSKNHLNEKWFQLCKQLEGLPRHTSTHAAGIIINDQPLHEFVPTMMGDTG
VLTQWTMTETEKLGLLKIDFLGLRNLSIIQQVVNQVKYQEKTEIDIENIPYDDQKVFQLL
SRGETTGIFQLESQGVRSVLKRLKPDHFLDIVAVTSLYRPGPMEEIPTYIKRRRKVEPIE
YLHPDLEEILKSTYGVIIYQEQIMQIASKFAGFSYGEADILRRAMSKKNRSVLENERKHF
INGSLSRGYEEQTAIKIFDLILKFADYGYPKAHAVAYSKIAYIMTYLKVHYPTYFYASIL
SNVVGNENKTEQMVTELKRIGVKIYPPSINHSEWFYKATKTGIYTSLGAIKTVGYQSVKS
LVEERKYRGPYKDMYDLVHRLPNKVKNKKLIQALIYVGALDDFKQTRATMLQSLDDVFES
SASVGDANNLLSELGLNVKKEFKEVEEMPSLMKSEYEKEYLGFYATEHPILTLFKQHQYL
TIYPIRVQNDKVPMLVMIASLRKIRTKKGQNMAFVNLIDGINEVEGVIFPDTYKKIETMN
IENKPLIIQGKFENRNGKMQIIINQIDLLEDYKEYKIKTTSELVVRNVFELNDWVTQNHK
SGIKVTYFNDEDYTSHNMGYLNSDKGNIKDFIDMIGYENIRLI
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggtaagtcatttaaatattcattcgtcatttgatttgttgaattctagtttgagaatt
ccagatgttattaaaaaggctaaaaatgaaaattatcaagcgcttgctataacagattta
aatgtcatgtatggagctttgcaattttatgatgaatgtttaaaacaaggtattaaacct
atatttggtttgaccatttatttagatgatcaattaaatgaattagaatgtgtgttgtta
gccaaaaatcaaactggttatcaaaatttagttaaattatcttcagcgatatctcttaaa
gaaagacattcaacgccaatcgagtggttaaatacttattcagaaggtttaatcataata
ggtaaaaacttaaatattgataatgaacatttattccattcaataaaaatatctgaccaa
gacaagtacatatcccatgattcatcagttgaagaaaattataaaaaagtgtatatgcaa
tcggctttatatttaaatgatgaagatagcgatagtttaattgcattaaatactattaaa
aataatgaaaaattaacaatatctgattttaatacgcatttaaaccaacattttttaact
atggaagaattaagccaaattgacgtctcatctaaatttatcaaaacaactgatgaaata
gctgaaaaatgtaatgtacaaattcaataccatcaagatttattgccgaagtatgttaca
ccaaatggcaaagatagtgatacttatctgtgggaattattgatgaacaataaatcaaac
tttccacaatttaacgacacttatgctgaaaggttgaaatatgagtatgacattatagta
tccatgggatattcagattacttccttatagtgagtgacttaataaattatgcgaaatca
aatgatgtgttagttggtccagggcgtggctcttcaggtggttcgctcgtaagttatata
ctaaatattacgacattggatcctattgaatatgacctattatttgagcgttttctaaat
ccagaacgtgtaactatgccggatattgatattgatttccaagatacgaagcgggataaa
gttattcaatatgtccaagagaagtacggtgataatagagtagcaggtatagtgacttac
ggtcatttgctagcacgagcagttgcaagagatgtaggtagaatattgcaatttgatgaa
ccaactttaaattatatatctaagttaataccacacaagttaggtataactttagacgag
gcatatgaaagtgatgaatttaaacaattcgtcagtaaaaatcatttaaacgaaaaatgg
ttccaattatgtaaacaattagaaggtttaccaagacatacttcgacacacgcagcaggt
atcattataaacgatcaacctttacatgaatttgtaccgacaatgatgggagatacaggt
gtattaacacaatggacgatgacagaaactgaaaaattaggtctgttaaaaatcgacttt
ttaggattaaggaatttatcaatcattcaacaagttgtgaatcaagttaagtatcaagaa
aaaactgaaattgatatcgaaaatataccttatgatgatcaaaaagtatttcaactatta
tcacgtggagaaactactggaatattccaactagaatctcaaggtgtaagaagtgtgttg
aaaaggttaaaacctgaccatttcttagatatagtagcagtgacttctttatatagacca
ggacctatggaagaaatacctacttatataaaaagaagaagaaaagttgaaccaattgaa
tacttgcatcctgatttagaagaaatcttaaagtctacatatggtgttattatttatcaa
gaacaaattatgcaaatagctagtaaatttgctggtttctcctatggtgaagctgatatt
ttaagaagggctatgagtaagaaaaatagatctgttcttgaaaatgaaagaaaacatttt
ataaatggaagtttaagtcgtggttatgaagaacagacagctattaaaatttttgattta
attttaaaattcgctgattatggttaccctaaagctcatgctgtcgcatatagtaaaata
gcttacattatgacttatttaaaagtgcattatcctacttacttttatgcatctatttta
tctaatgtagttggtaatgaaaataaaactgaacaaatggttacagaattaaaaaggata
ggtgtaaaaatttatccgccatctattaatcatagtgaatggttctacaaagcaaccaaa
actggtatatacacatctttaggtgcaattaaaactgtcggttatcaaagcgtaaagagt
ttagtagaagaaagaaagtatagaggaccttataaagatatgtacgacttagtgcatagg
ctaccaaataaagttaagaataaaaaactaattcaagcacttatttatgttggggcgtta
gatgattttaagcaaactagagcaacaatgctacagtctttagatgatgttttcgaaagt
agcgcatctgttggagatgcgaataatttactttcagagttaggtttaaatgttaaaaaa
gaatttaaagaagtagaagaaatgcctagtttaatgaaaagtgaatatgaaaaagaatat
ttaggattttatgctacagaacatcctatcttaacattatttaagcagcatcaatattta
acgatttatccaattagagtacaaaacgataaagtgccaatgcttgttatgattgcttct
ttaagaaaaataagaactaaaaaaggacaaaacatggcattcgttaatttaattgacggt
attaatgaagttgaaggcgttatttttccggatacgtataaaaaaattgaaacaatgaat
atagaaaataaacctttaattattcaaggcaaattcgaaaacagaaacggtaaaatgcaa
ataattatcaaccaaatagatttattagaagattataaagagtacaaaatcaaaacaact
tctgaattagttgttcgaaatgtatttgaacttaatgattgggttacgcaaaatcataaa
agtggcattaaagtaacttattttaatgacgaagattatacatctcataatatgggttat
ttaaattctgataaaggaaatattaaagattttatcgatatgataggttacgaaaatata
cgattgatatag
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