Mammaliicoccus lentus: H3V22_05310
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Entry
H3V22_05310 CDS
T07021
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
mlen
Mammaliicoccus lentus
Brite
KEGG Orthology (KO) [BR:
mlen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlen03021
]
H3V22_05310 (sigB)
Transcription machinery [BR:
mlen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H3V22_05310 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
GerE
Sigma70_ECF
Cap4_nuclease
Dehyd-heme_bind
KORA
HTH_3
HTH_16
TnsD
DUF134
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QMU11609
LinkDB
All DBs
Position
complement(1047037..1047807)
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AA seq
256 aa
AA seq
DB search
MTEESKAYKEVSPNEINAWIADYQENNNNDAQEKLVLHYQKLIESLAYKYSKGQAHHEDL
VQVGMVGLLGAIKRFDTSFERKFEAFLVPTVIGEIKRYLRDKTWSVHVPRRIKEIGPKIK
RANEELTNELGRSPKIIEIANRLEVTEEDVLEAMEMGQSYNALSVDHTIEADKDGSTVTL
LDIMGDSEEGYDLTEKRMILEKILPILTEREREIIQYTFITGLSQKETGEKIGLSQMHVS
RLQRTAIKKLQEAAMK
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagagtccaaagcttataaagaagtttcaccaaatgaaataaatgcatggatt
gcagactatcaggaaaataataataatgatgctcaagaaaaacttgtattacattatcaa
aagttaatcgaatcattagcttataaatattctaaaggtcaagcacaccatgaagatctc
gttcaagtaggtatggtcgggttgttaggcgcaattaaaagatttgatacatcgttcgaa
cgtaaattcgaagcttttttagtgccgacagtaattggtgaaattaaaagatatcttaga
gacaaaacatggagtgtacacgttcctagaagaattaaagaaattggcccaaagattaaa
agagctaatgaagagttaacgaatgaattaggtcgttcgcctaaaattattgaaattgca
aataggttagaagtaacagaagaagatgtattagaagctatggaaatgggacaaagttat
aatgcattgagtgtcgaccacactattgaagcagataaagatggatcgactgttacgctg
ttagatataatgggagattcagaagaaggttacgatttaactgaaaaaagaatgatactt
gaaaaaattctaccaatattaacagagcgtgaacgggaaatcattcaatacacgtttata
acaggcttgagtcagaaagaaactggagaaaaaattggacttagccagatgcatgtttct
agattacaaagaacagcaattaaaaagttgcaagaagcagccatgaagtga
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