Mammaliicoccus lentus: H3V22_05365
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Entry
H3V22_05365 CDS
T07021
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mlen
Mammaliicoccus lentus
Pathway
mlen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H3V22_05365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlen03019
]
H3V22_05365
03009 Ribosome biogenesis [BR:
mlen03009
]
H3V22_05365
Enzymes [BR:
mlen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H3V22_05365
Messenger RNA biogenesis [BR:
mlen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H3V22_05365
Ribosome biogenesis [BR:
mlen03009
]
Prokaryotic type
rRNA helicases
H3V22_05365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Flavi_DEAD
SUa-2TM
Cas3-like_C_2
GRP
Acetyltransf_15
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QMU11620
LinkDB
All DBs
Position
complement(1054532..1056061)
Genome browser
AA seq
509 aa
AA seq
DB search
MQKFKELGISEATLNALDGMGFTEPTPIQVESIPHTLNGTDVLGQAQTGTGKTGAFGIPL
IDKVADKQGVQALILAPTRELAMQVAEQLRTFSKGQNVNVITVFGGMPIDRQIKSLKKGP
QIVVGTPGRVIDHLNRKTLKTDSITTLILDEADEMMNMGFIDDMRFIMSKLPSENRQTLL
FSATMPKAIQELVQKFMKSPKIVKTMSNELSDPQIDEYYTIVKELEKFETFTNLLDVQNP
ELAIVFGRTKRRVDELTSALITKGYRAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKKGAAVTFVNPIEMDYIRQIEKANK
RQMTALRPPTPGEVMKAKESDVKAKVKKWVENPIEGRIEKIAEELISEYGNQKLVAALLQ
ELIKSNDEADVQLTFEKPLSKKSGYKGKQGNRSGGGSRGKSRTRFDGKNKRRSNDKNNNF
DRNKGKNNKPSKPRSKKQFSGRTFAEHSK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaaatttaaagaattaggtatttccgaagctaccttaaacgctttggacggaatg
ggatttactgaaccaacacctattcaagtggagagtattccacatacattaaatggtaca
gatgtgttaggtcaagcacaaactggtacaggtaaaacaggtgcttttggtattccatta
atagataaagtagccgacaaacaaggcgtacaagcattaatacttgcaccgacgcgtgaa
ttagcaatgcaagtagcagaacaattacgtacctttagtaaaggtcaaaacgtaaatgtt
atcactgtatttggtggtatgccaatcgatagacaaattaaatcattgaaaaaaggacct
caaattgtagtaggtactcctggacgtgttattgaccacttaaatagaaaaacgttaaaa
acagattctattaccactttaatattagatgaagcagatgaaatgatgaacatgggcttt
atagatgatatgagatttataatgtctaaacttccaagtgaaaatcgtcaaacattacta
ttctctgctactatgcctaaagcaattcaagaattagtacaaaaattcatgaagagccct
aaaatcgttaagacgatgtcaaacgaactttctgatcctcaaattgatgaatattatact
attgttaaagaacttgagaagttcgaaactttcacaaacttactagacgtacaaaatcca
gaattagcaattgtatttggccgtacaaagagacgtgtagatgaattaacaagtgcttta
atcactaaaggttatcgtgctgaaggtttacacggagatattacacaagctaaacgttta
gaagtattgaaaaaattcaaaaatgaccaaattgatattctagttgctactgatgtagcg
gcacgtggattagatatttctggcgtaagtcatgtttataactttgatattcctcaagat
actgaaagctatactcaccgtattggtcgtacaggtagagcaggtaaaaaaggcgctgca
gtaacatttgttaacccaattgaaatggattatatccgtcaaattgaaaaagcaaacaaa
cgtcaaatgactgctttacgtccaccaacaccaggtgaagtaatgaaagcaaaagaatca
gatgttaaagctaaagttaaaaaatgggtagaaaacccaattgaaggccgtatcgaaaaa
attgctgaagaattaatcagtgaatacggtaatcaaaaattagtagcagctttattacaa
gaattaattaaatctaatgatgaagctgacgtacaattaacatttgagaaaccattatct
aaaaaatcaggttacaaaggtaaacaaggcaaccgcagtggtggcggtagtcgtggtaaa
tctagaactagatttgatggcaaaaacaaacgtcgtagcaatgataaaaacaataatttt
gaccgtaataaaggtaaaaataataaacctagtaaaccacgttcaaaaaaacaattctca
ggtagaacattcgctgagcattcaaaataa
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