Mammaliicoccus lentus: H3V22_12235
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Entry
H3V22_12235 CDS
T07021
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mlen
Mammaliicoccus lentus
Pathway
mlen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H3V22_12235 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlen03019
]
H3V22_12235 (recQ)
03400 DNA repair and recombination proteins [BR:
mlen03400
]
H3V22_12235 (recQ)
Enzymes [BR:
mlen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H3V22_12235 (recQ)
Messenger RNA biogenesis [BR:
mlen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H3V22_12235 (recQ)
DNA repair and recombination proteins [BR:
mlen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H3V22_12235 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Receptor_IA-2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QMU10328
LinkDB
All DBs
Position
2447147..2448925
Genome browser
AA seq
592 aa
AA seq
DB search
MQNILKEYFGYQQFRDGQKEIIDKVIDHRPTLGVMPTGGGKSICYQVPGLYLDGVTIVIS
PLISLMKDQVDSLRSMGIKAEFLNSTLTNKEKNRVERELVSGQVKFLYIAPERFNQPQFV
QLINKCNIQLIAFDEAHCISKWGHDFRPSYQEVITHVMSLPHHFRLVALTATATQEVQED
ISQKLGIAEQDIVETSIKRENLTFKVNSTYQRLNFVKDYVKSHINQSGIIYCSTRKQVEQ
LSETFDDLDIKNVMYHAGLPKEERERAQRKFIDDDIKLAVATNAFGMGIDKSNVRFVIHY
NMPQDIESYYQEAGRAGRDQLDSECILLFSDRDIDLQKFFISSSQADDEYKEKQGEKLRQ
MIQYTKTTKCLEAMMIHYFNPDEKLEECGRCSSCLEAKKSYDMTTEAQKILSCIARLKQQ
EKRNMIIQVLRGEKSTQITSLGYEELSTYGILKDYTTNECHHLLDELRFKGYLNEYKEVL
SVDQSAMEVLRGNVQIMTTPFKSKPKEIVDIQTITDVDRSLFNRLVEVRKDLSKELEVSP
LSIFSDQILEQFAKRLPESKKEMIMIDGIGSYKLKHYCPIFIDTIKKYKQPI
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatattttaaaagaatactttgggtatcaacaatttagagatggacagaaagaa
attattgataaagtgattgatcatcgaccaacattaggtgttatgccgactggcggaggt
aaatcaatttgttatcaagtaccaggactttatttagatggcgtaacaattgtcatcagt
cctttaatctccttaatgaaagaccaagttgacagcttaaggtctatggggattaaagct
gaatttttaaatagtacattaacaaataaagagaagaatagagtagaaagagaacttgtt
tcaggacaagttaaattcctatatattgcaccagagcgctttaatcaaccacaatttgta
caattaataaataaatgtaatattcaacttatagcatttgatgaagcccattgtatatct
aaatggggacatgattttaggccgagttatcaagaagtgataactcatgttatgagttta
ccacatcattttagattagttgcattaactgctacggctactcaagaagtacaagaagat
atttcacagaaactaggaatagcagaacaagatattgttgaaacttctattaaacgtgaa
aatttaacatttaaagtaaatagtacgtaccaaagattgaacttcgtcaaagattatgta
aaaagtcatattaatcaatcaggcatcatttattgttcaacaagaaaacaagtagaacaa
cttagtgagacttttgacgatttagatataaaaaatgttatgtatcacgctggtttgccg
aaagaagaaagagaacgtgcacaaagaaaatttatagatgatgatataaaattagcagtc
gctaccaatgctttcggaatgggaatagataaatctaatgtgagatttgtgattcattat
aatatgcctcaagacatcgagtcttattatcaagaagcaggtagagcaggacgagatcaa
ttagacagtgaatgtatattgctattctctgatagagatattgatttacaaaaattcttt
atttcttctagccaagcggatgatgaatataaagaaaaacaaggcgagaagttaagacaa
atgattcaatacacgaagacaacgaaatgccttgaagcgatgatgattcattatttcaac
cctgatgaaaaacttgaagagtgtggaagatgttcaagttgtttagaagctaaaaaatca
tacgatatgactactgaagcacagaaaattttaagttgcattgcgagattaaaacaacaa
gaaaaaaggaatatgattatacaagtacttagaggtgagaaatcaactcagataacatct
ttagggtatgaagagctaagtacttatggaatactaaaagattatactacaaacgaatgt
caccatttattagacgagttaaggtttaaaggatatttaaatgaatataaagaagtattg
agtgttgaccaatcagcgatggaagttttaagaggtaatgtacaaattatgacaacacca
tttaaatctaaacctaaagagattgtagatatacaaacaataacagatgtagaccgctca
ttatttaatcgtctagttgaagttagaaaagacttaagtaaagagttagaagtatccccg
ttatctatcttttctgaccaaattttagaacaatttgcgaaacgcctacctgaatctaaa
aaagaaatgattatgatagatggaataggtagttataaattaaaacactattgtccaata
tttattgatacaattaaaaaatataaacaaccaatttaa
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