KEGG   Mammaliicoccus lentus: H3V22_13860
Entry
H3V22_13860       CDS       T07021                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
mlen  Mammaliicoccus lentus
Pathway
mlen03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mlen00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H3V22_13860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mlen03019]
    H3V22_13860
Messenger RNA biogenesis [BR:mlen03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     H3V22_13860
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QMU10632
LinkDB
Position
complement(2781636..2783309)
AA seq 557 aa
MKPIQKNEVGVYALGGLGEIGKNTYALEYQDEIIVIDAGIKFPDDDLLGIDYVIPDYTYL
IQNKHKVKALFITHGHEDHIGGVPYLLKQFNVPIYSGPLALGLIRNKLEEHHLLKTAQLN
EITEDSVFEFKHFKISFYLTTHSIPEAYGIIADTPQGKIVHTGDFKFDFTPVGQPANIAK
MAQLGEEGVLCLLSDSTNSEVPNFTLSEKEVGQNVDEIFRKCTGRIIFATFASNIYRVQQ
AVEAAVKYNRKIVVFGRSMENNIKIGTDLGYIKVPPETFIEPNKINTVPKHEILILCTGS
QGEPMAALSRIANGTHRQISIIPDDTVVFSSSPIPGNTKSVNRTINALYKAGADVIHGKL
SNIHTSGHGSQDEQKLMLRLIKPKYFMPIHGEYRMLKKHSETGVNCGVDPDNIFVYEIGD
VLALTKDSARYAGRIPSGSVFVDGSGIGDIGNVVIKDRKVLSEEGLVIVVVSIDFKTKQL
LSGPDIISRGFVYMRESGHLIYDAQRLIKKSVIEKLNNNDKVEWHHVKATITEALQPYLY
EKTARKPMILPIIMKIK
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgaaacccatccaaaaaaatgaagtaggtgtatatgcactgggaggactcggtgaaata
ggtaaaaacacgtacgccctcgaatatcaagatgaaataatcgtaatagatgctggtatt
aagttcccagatgacgatttgcttggtatcgattacgtgatacctgattatacttactta
atacaaaacaaacataaagtaaaagctttattcattacacatggacacgaagaccatatt
ggtggcgtcccttatctacttaaacaatttaatgttcccatatacagtggaccattagct
ttaggtttaattagaaataaattagaagaacatcatttactaaaaactgcacaactcaat
gaaataactgaagactctgtgtttgaatttaaacactttaaaatctcattttatttaaca
acacatagtatacctgaagcatacggtattatagctgatacacctcaaggtaaaattgtt
catactggtgacttcaaatttgatttcacacctgttggacaaccagcaaatattgctaaa
atggctcaattaggtgaagaaggcgtactttgtttactttcagattctactaactctgaa
gttcctaactttacactaagtgaaaaagaagttggacaaaatgtagatgagattttccgt
aaatgtacaggaagaattatttttgcgactttcgcatcaaatatatatcgtgtacaacaa
gctgttgaagctgccgttaaatacaatcgtaaaattgtagtattcggtcgttcaatggag
aacaacattaaaattggtactgatttaggatatattaaagtaccacctgaaacatttatt
gaacctaataaaatcaatactgtgcctaagcatgaaatattaattttatgtacaggttct
caaggtgaaccaatggctgctttatctagaatagctaatggcacacatagacaaatcagt
attatacctgatgatacagtagtatttagttcttcccctattccaggtaatacaaagagt
gttaacagaacaataaacgcgctttataaagctggagcagatgttatccatggtaagttg
tcgaatattcatacatctggacacggttctcaagatgaacaaaaattaatgcttcgttta
attaagccaaaatatttcatgccgattcatggtgaatatagaatgcttaagaaacacagt
gaaacaggtgttaactgtggcgttgatcctgataatatatttgtatatgaaatcggtgat
gtattagcacttacgaaagattctgcacgatacgcaggacgcataccttctggaagtgtg
ttcgtagatggaagcggaattggagatataggcaacgttgttataaaagaccgtaaagta
ttatcagaagaaggtttagtaattgtagttgtaagcattgactttaagacaaagcaattg
ctttctggtcctgatattatatctcgtggttttgtatacatgagagaatctggtcattta
atttatgatgcacaacgattaattaaaaagtcagtaattgagaaattaaataataatgat
aaagttgaatggcatcatgttaaagcaacaataacagaagcgttacaaccgtatttatac
gaaaaaactgctcgtaaaccaatgattttaccaatcattatgaaaatcaaataa

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