Mandrillus leucophaeus (drill): 105538945
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Entry
105538945 CDS
T08763
Symbol
RTCB
Name
(RefSeq) tRNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mleu
Mandrillus leucophaeus (drill)
Brite
KEGG Orthology (KO) [BR:
mleu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mleu03016
]
105538945 (RTCB)
Enzymes [BR:
mleu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
105538945 (RTCB)
Transfer RNA biogenesis [BR:
mleu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
105538945 (RTCB)
Prokaryotic type
tRNA splicing ligases
105538945 (RTCB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Cu-oxidase_4
Motif
Other DBs
NCBI-GeneID:
105538945
NCBI-ProteinID:
XP_011834382
Ensembl:
ENSMLEG00000040505
UniProt:
A0A2K5ZXS0
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MSRSYNDELQFLEKISKNCWRIKKGFVPNMQVEGVFYVNDALEKLMFEELRNACRGGGVG
GFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDSEAVVSPGGVGFDI
NCGVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSL
REGYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGLPQLGTLGAGNHYAEIQVVDEIFNE
YAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARIAS
PEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDLHVIYDVSHNIAKVEQ
HVVDGKERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMT
ETFGTTCHGAGRALSRAKSRRNLDFQDVLDKLADMGIAIRVASPKLVMEEAPESYKNVTD
VVNTCHDAGISKKAIKLRPIAVIKG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcagctataatgatgagctgcagttcttggaaaagatcagtaaaaactgctgg
aggatcaagaagggcttcgtgcccaacatgcaggttgagggcgttttctacgtgaatgat
gctctggagaaattgatgtttgaggaattaaggaatgcctgtcgaggtggtggtgttggt
ggcttcttgccagccatgaaacagattggcaacgtggcagccctgcctggaattgttcat
cgatctattgggcttcctgatgtccattcaggatatggatttgctattgggaacatggca
gcctttgatatgaatgactctgaagcagtggtatccccaggtggtgtcgggtttgacatc
aactgtggtgtccgcttgctaagaaccaatttagatgaaagtgatgtccagcctgtgaag
gagcaacttgcccaagctatgtttgaccacattcctgttggggtgggatcaaaaggtgtc
atcccaatgaatgccaaagacttggaggaggccttggagatgggggtggactggtcctta
agagaagggtatgcctgggctgaagacaaggagcactgcgaggagtatggaaggatgctg
caagctgaccccaataaggtttctgcaagggctaagaaaagaggccttcctcagttgggg
accctgggagcaggcaaccattatgcagaaatccaggttgtggatgagattttcaatgag
tacgctgctaaaaaaatgggcatcgaccataagggacaggtgtgtgtgatgatccacagt
ggaagcagaggcttgggccaccaagtagccacagatgcactggtagctatggagaaggcc
atgaagagagacaagattatagtcaatgatcggcagttggcttgtgctcggatcgcttca
ccagagggtcaggactacctgaagggaatggcagcagctgggaactatgcctgggtcaac
cggtcttccatgaccttcttaacccgtcaggcttttgccaaggtcttcaacacaacccct
gatgacttggacctgcacgtgatctatgatgtttctcacaacattgccaaagtggagcag
catgtagtggacgggaaggagcggacactgttagtacacaggaagggatccacccgcgct
ttccctcctcaccatcccctcatagctgttgattaccaactcactggacaaccagtgctc
attggtggcaccatgggaacttgtagttatgttcttactggcactgaacagggcatgact
gagacctttggaacaacctgtcatggagcgggccgtgcattgtcccgagcaaaatctcga
cgtaatttagatttccaggatgttttagacaaattggcagatatgggaattgcaatccgt
gttgcctcacccaaactggttatggaagaggctcctgagtcctataagaatgtgacagat
gtggtgaatacctgccacgatgctggaatcagcaagaaagccattaaactgagaccaatt
gctgtgatcaaagggtag
DBGET
integrated database retrieval system
