Mandrillus leucophaeus (drill): 105548386
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Entry
105548386 CDS
T08763
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain isoform X1
KO
K24357
collagen type XX alpha
Organism
mleu
Mandrillus leucophaeus (drill)
Pathway
mleu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mleu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
105548386 (COL20A1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
VWA_2
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
DUF4959
Motif
Other DBs
NCBI-GeneID:
105548386
NCBI-ProteinID:
XP_011847789
Ensembl:
ENSMLEG00000028700
LinkDB
All DBs
Position
Unknown
AA seq
1279 aa
AA seq
DB search
MSSRAPAHLGLGLCLWLWLSTTLGREQGQASGHLRLTVLPEDRLQMKWRESEGSGLGYLV
QVQPMAGDSEQEVILTTKTPKATVGGLSPSKGYTLQIFELTGSGRFLLARREFVIEDLKS
SSLDRNNQRPLSNGAPEPTPSLMGSPDPEQASEPRVAFVPSRDPPIPGGPQFRCLPPVPA
DMVFLVDGSWSIGHSHFQQVKDFLASVIAPFEIGPDKVQVGLTQYSGDAQTEWNLNSFVT
KEQVLAAVHRLRYKGGNTFTGLALTHVLGQNLQPAAGLRPEAAKVVILVTDGKSQDDVHT
AARVLKDLGVNIFAVGVKNADEAELRLLASPPRDITVHNVLDFPQLGALAGLLSRLICQR
LQDGGPRRGPAAAPALDTLPAPTGLVLSQVTSSSIHVSWTPAPRLPLKYLIVWRASRGGT
PREVVVEGPATSAELHNLTSRTEYLVSVFPIYEGGVGEGLRGLVTTAPLSPPRALTLATV
TPRTVHLTWQPSAGATHYLVRCSPASSKGEEEEREVQVRRPEVLLDGLEPGRDYEISVQS
LRGPESSEARGIRARTPVLAPPRHLGFSDVSHDTARVIWEGAPRPVRLVRVTYVSSEGGH
SGQTEAPGNATSAMLGPLSSSTTYTVRVTCLYLGGGSSTLTGQVTTKKVPSPSQLSVTEL
PGDTVQLAWVAAAPSGVLVYQIKWTPLGEGKAHEISVPGNLGTAVLPGLGRHTEYDVTIL
AYYRDGARSDPVSLRYTPSTVNRSPPSNLALASETPDSLQVSWTPPRGRVLHYRLTYAPA
SGSGPEKSVSVPGPRSHVTLPDLQAATKYRVLVSAVYAAGRSEAVSATGQTACPALRPNS
SLPGFDLMVAFGLVEKAYASIRGVAMEPSAFGGTPTFTLFKDAQLTRRVSDVHPAPLPPE
HTIVFLVRVLPETPREAFALWQMTAEDFQPVLGVLLDAGRKSLTYFHRDPRAALQEATFD
PQEVRKIFFGSFHKVHVAVGRSKVRLYVDCRKVAERPLGEVGSAPSAGFITLGRLAKARG
PRSSSAAFQLQTLQIVCSDTWADEDRCCELPASRDGETCPAFVSACSCSSETPGPPGPQG
PPGLPGRNGTPGEQGFPGPRGPPGVKGEKGDHGLPGLQGHPGHQGIPGRVGLQGPKGMRG
LEGTAGLPGPPGPRGFQGMAGARGTSGEKGPPGAVGPTGLPGPKGERGEKGEPQSLATLY
QLVSQASHVSKFDSFHENTRPPMPILEQKLEPGTEPLGSPGTRSKALLPGEWRHGSRHLE
GRGEPGAVGQTGSPGQQGG
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccgagcccctgcacacctcggcctcggcctctgcctctggctgtggctgagc
accaccctgggaagagagcaaggacaagcaagtggccacctgaggctgactgtgctgcct
gaggaccggctacagatgaagtggagagagtcggaggggagcggcctcggctacctggtg
caggtgcagcccatggcaggggactcggaacaggaggtgatactgaccaccaagacccct
aaggccacagtggggggcctgagcccctccaagggctacaccttgcagatcttcgagctc
actggctctgggcgcttcctgctggctcggagggagtttgtgattgaggatctgaagagt
agctccttggacaggaacaaccagagacctctcagcaatggagccccggagcccaccccc
tcccttatggggagcccagaccctgagcaggcttccgagccccgagttgcctttgtgcca
agccgggatccgcccattcctggtggcccccagttccgctgcctaccccctgtgcctgct
gacatggtcttcctggtggacgggtcctggagcatcggccacagtcactttcagcaggtc
aaggacttcctggccagcgtcattgcaccctttgaaatcgggccggataaggtccaagta
ggcctgactcagtacagcggcgatgcccagactgagtggaacctgaactccttcgtcacc
aaggagcaggtgctggcagctgtgcaccgcctccgctacaagggggggaacacgttcaca
ggcctcgccctgacccatgtgctggggcagaacctgcagccggcggccggcctccgtcca
gaggcggccaaggtggtgattctggtgacggacggcaagtcccaggacgatgtgcacact
gctgctcgtgtcctcaaggacctgggcgtgaacatcttcgctgtgggtgtgaagaacgcc
gatgaggctgagctgaggctcctggcatccccgccgcgggacatcaccgtccacaacgtg
ctggactttccgcagcttggcgcactggctggcctgctcagccgcctcatctgccagagg
ctgcaggatgggggcccgcggcggggcccagcagcggctccagccctggacaccctcccc
gcccccaccggcctggtcctgagccaggtgacctcctccagcatccacgtgtcctggact
ccagccccccgactccccctcaagtatctgattgtttggcgagcctccagaggtggcacc
cccagggaggtggtggtggaggggcctgccacctccgcagagctgcacaacctgacctcc
cgcacggagtacctggtctccgtgttccccatctacgagggcggggttggcgagggcctg
cggggcctggtgaccacagcacctctgtctccaccccgggcgctgaccctggccacagtg
actcccagaaccgtccacctcacctggcagccctcggccggggccacccactacctggtg
cgatgctcacctgcttcctccaagggtgaggaggaggagcgagaggtgcaggtgaggcgg
cccgaggtgctgctggatggcctggaaccaggcagggactatgagatctcggtgcagagc
ctgcgaggccctgagagcagcgaggcccggggcatccgtgccaggacccccgtcctggcc
cccccgagacacctgggcttctcagacgtgagccacgacacagcgcgagtgatctgggag
ggcgccccaaggcctgtgcgcctggtcagggtcacctatgtctccagcgagggtggacac
tcggggcagacagaggctcctgggaatgccacctcggccatgctggggcccctctcttcc
tccaccacctacactgtccgcgtcacctgcctctaccttgggggtggctcctctacgctg
accggccaggtcaccaccaagaaagttcccagcccaagccagctgtccgtgacagagctg
ccaggggacacagtccagctggcatgggtggccgcagccccatctggggtgcttgtctac
cagatcaagtggacgcccctgggagaggggaaggctcacgagatctctgtcccagggaac
ctcggcacggccgtcctgcctggcctagggaggcacacggagtatgacgtcaccatcctg
gcctactacagggacggcgcccgcagtgaccctgtgtccctccgctataccccctccacg
gtgaacaggagccccccctccaacctggccctggcctcggagacccccgacagcctgcag
gtcagctggacacccccacgtggccgcgtgctccactaccggctcacctacgcgcccgcc
tctggctcaggacccgagaaatccgtctccgtgccaggacccaggagccacgtgacactc
cccgacctgcaggcagccaccaagtacagagtcctggtctcagctgtctatgcagcaggc
aggagtgaggctgtgtctgccacgggccagacagcctgcccagccctccgcccgaacagt
tccctcccagggtttgacctgatggtggccttcggcctggtggaaaaggcttacgcttcc
atccggggcgtggccatggagccctctgccttcggtgggaccccaaccttcacgcttttc
aaggacgcccagctgacaagacgggtcagtgacgtccacccagccccgctccctccagag
cacaccatcgtcttccttgtgcgcgtgcttcccgagacgccccgtgaggcctttgcgctg
tggcagatgacggccgaggacttccagcccgtcctcggggttctgctggacgccgggagg
aagtccctgacctacttccaccgcgaccccagggctgccttgcaggaggccaccttcgac
ccgcaggaagtgaggaagattttcttcgggagcttccacaaggtgcacgtggctgtgggc
cgctccaaggtcaggctctatgtggactgcagaaaggtggctgagcggcccctcggggag
gtgggcagcgcaccctctgccggcttcatcacgctggggaggctggccaaggccaggggc
ccccggagcagctcggccgcgtttcagctccagacattgcagatcgtgtgcagtgacacc
tgggccgacgaggaccggtgctgtgagctccctgcctcgagggatggagagacctgcccg
gccttcgtgtctgcctgctcctgttcctcagagacccctgggcccccagggccccaggga
cccccaggcctccctgggaggaacggcactccgggagagcagggcttccccgggcccagg
ggtccaccaggggtcaaaggagagaaaggagaccatgggctcccaggcttgcagggccac
cccggccaccagggcatccccgggagagttggcctccagggaccaaagggaatgagaggc
ctggagggaactgctggcctgcccggaccccctggccccagggggttccagggcatggca
ggggccaggggcactagtggagagaaaggacccccaggggccgtggggcccacagggctg
ccggggcccaaaggggaacgaggagagaagggcgagccgcagtccctcgccaccctctac
cagcttgtgagccaggcctcacacgtgtcaaagtttgactccttccacgagaacaccagg
cccccaatgcccatcttggagcagaagctggagccgggcactgagcccctggggtcccct
ggcacccgcagcaaggccctgcttcctggagaatggaggcatggtagccgccacctagag
ggcagaggggagcctggagctgttggtcagacgggcagccctgggcagcaggggggctag
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