Myotis lucifugus (little brown bat): 102417329
Help
Entry
102417329 CDS
T07795
Name
(RefSeq) probable ATP-dependent RNA helicase DDX60
KO
K20103
ATP-dependent RNA helicase DDX60 [EC:
5.6.2.7
]
Organism
mlf
Myotis lucifugus (little brown bat)
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlf03019
]
102417329
Enzymes [BR:
mlf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102417329
Messenger RNA biogenesis [BR:
mlf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
102417329
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIN-like_DDX60
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
102417329
NCBI-ProteinID:
XP_023608756
LinkDB
All DBs
Position
Unknown
AA seq
1643 aa
AA seq
DB search
MVSLLKDFVESEFFLIDGDSLLIACFLNVNFKKGQTLHFFYIVEQFLHDFIQKEAKFVLV
FFKDAENLYYNYPEILALRTILIYHLEYNTDVTIHTEFSNCLTPEWEIFLKECYPYFLIV
SDTGISTHQTDFLNILIMHALQKKINIVQILGIESDVLRIYGYCASSLYMHKQFFEKHEI
QLQHALHAYIIEHYQRSQEREIFLYGHLKLNLGEMQKEIHQTLSLLLNLWPEGADVRSVV
CSISCAVTLKHYKKILHDAQDYENLNICTENHNTQDLKKPLTLKEAADLCRMHCLSVIFL
QRLPLLQRAKSRIITYTWDRTLVPFLKMLKRCQFFILKHLKARNNWNVNFTGLPDLTDNS
LWKNIAYYYEIEHNRGLNLELGNTLKQGYEELWNTVLTLSEDDDFGGSMPVRTTSRPFLT
QKKTSPRVPGSNQGSHKLGLIPLKAEIIEDYAGDILSELPFLSSDDPAVTSLSKKEEFDE
LTHWHSSRPLSDDFERTKCNSDAKSKDVKERRNVQKLHHFYHVFGKSLVGSNKSIRITRG
SALPPPENSSVQKKKKHQTNAEKFIEENQKRQLAKLEKKEEERWKNLSVYIEKEMKENPN
SGIKKLDFLQTCPVKSVEFAAEMVGLDACFKLWMECCSKPEQKKSRDMNIIINLMKWIHI
IHEKHSELLKNTDRRKLAKYLKYVGFDNLAHALYPQVGAIENIIAEKDISKYSVCMGAAR
FQLTYMGHYLLREERSDPDPRVHHFIPDTWQRELLDVVDNNESAVIVAPTSSGKTYASYY
CMEKILRESDEGVIVYVAPTKALVNQVVGTICSLFTKALPKGLVVCGVFTRDYRHDTLNC
QILVTVPQCLEILLLSPRNQKWVKRMRYVIFDEVHCLGGEIGAEVWEHLLVMIRCPFLAL
SATISNPEHLTEWLVLIKRYWQDVESKMENSSSLQNVLKVSKKQQRKRIEKPSYRVRLVW
YTERYNDLEKYVCSLKDNEFIIEHYHPCAALTVNHIKKYGIPLDLGFSPRESILLYDAMV
HVWPEWTRIKELEPEEFSCFKNKIVITRADAKKYEEELKKEIIHWSHLDPSKVNQLFMYL
KPQTFDSAEIEKRRMFPHFVEKLKEMNRLPAIFFSYFNSDSGARIQRIILLAAEIKEIKK
NLKKHYEISPDCTYTDRTVVDYQTLAKILRRLRGTRQGYKLHGLLRRGIGYHHGSMEIRQ
RQVVEMLFRLKHLKVITATSTLALGINMPCKSVVFMEDSVFLDALNFRQMSGRAGRRGED
LIGNVFFYDIPLPKIERLLKSNVPKLKGQFPLSISLVLRLMLLVAKADDKEDAKAKALSV
LQYSLMSFKQPKINCMLKFYFIYSLQFLVREEYLNLECIPIGYSGLVSHLHYHEPANFVL
VSLLKKRLFHKLCVPTKIKGKHFSEEVMETLVVVLANLFGRHYLPPCVKNFKKEFSHSVV
VLDDLPKEFAAVVKEHNTRIQENFGSFLLTISKLADMRKESQLPLSEIDFSGKECEDSEL
VSHLMPGTESRTAVSPFACLSNITDQDLFDVDVINDAKLRTIDVNVQNIPFLCLNKYDTN
GRKCPLNGYVLNFYKNRSLSALTLDNWLNMGDAFTLIRDFALTVQSIRISLSELCDDEDD
NVLLAFKQLSKAFHSILGKKAID
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcttacttaaagactttgttgagtctgaattttttttgattgatggagattca
ttactcatcgcttgttttcttaatgtgaacttcaagaaaggacaaactcttcacttcttt
tatattgtagaacaatttctgcatgatttcatccaaaaggaagccaaatttgtattagtt
ttttttaaggatgcagaaaatctgtattataattaccctgaaattctggcccttcgtacc
atattgatatatcatttagaatacaacactgatgtcactattcatacagaattttccaac
tgtctgacaccagaatgggagatatttcttaaagaatgttatccatatttcctcattgtc
tcagatacgggaatatcaactcatcaaacagattttttaaacattttgatcatgcatgct
cttcagaagaaaatcaatattgtacagattttgggaatagagtccgatgtccttagaatt
tatggatactgtgcctcaagtctctatatgcacaaacagttttttgaaaagcatgagata
caactgcaacatgccttacatgcctacataatagagcattaccaaaggtcacaggagaga
gaaatatttctctatggtcatttgaaactaaacttgggagaaatgcagaaagagatacat
cagaccttgtccttgcttctcaatctgtggcctgaaggagctgatgtaagaagtgttgtc
tgctctatttcatgtgctgtgacactaaaacactataaaaaaattttacatgatgcccaa
gactacgaaaacctaaacatatgcacagaaaatcataacacacaggacttgaagaaaccc
ctaacactaaaggaagcagcagatctttgcagaatgcactgtctcagtgtgattttcctt
cagcgtttacccctgcttcaaagagctaagagtagaattattacttatacttgggacaga
acacttgtaccatttctaaagatgctaaaaagatgtcaatttttcatcttaaaacattta
aaagcaaggaataattggaatgtgaatttcactggcctacctgacttaactgataatagt
ttgtggaaaaatattgcttattattatgaaattgaacataatagagggctcaatttggaa
ttgggtaacactttgaaacagggatacgaggaattgtggaacacagtcttaacattatca
gaggatgatgattttggaggatctatgcctgtgaggacaacatccagaccatttcttaca
cagaaaaaaacatcacctagagtaccaggatcaaatcaaggaagtcataaattaggactc
attcctctgaaagctgagattatagaagattatgctggagatattttgtcagaactacct
tttctaagcagtgatgacccagctgttacatctctttctaagaaggaagaatttgatgaa
ctcacacactggcattcttctagacctctcagtgatgattttgaaaggacaaagtgcaac
agtgacgctaaatccaaagatgtcaaagaaagaaggaacgtgcagaaattacatcatttt
tatcatgtctttggaaaatctttggtaggaagcaacaaatcaataaggattacaagagga
agtgctctgccacctccagaaaattcttcagtacaaaagaaaaaaaaacaccagacaaat
gcagaaaaatttattgaggaaaaccaaaagagacagctagctaaactagagaaaaaagag
gaagaaagatggaaaaacttgtcagtatatattgaaaaggaaatgaaagaaaatcctaat
tctggaataaaaaaactagattttctccaaacatgccctgttaaatctgtagaatttgct
gcagaaatggtaggattggatgcctgtttcaaattatggatggaatgctgttcaaaacca
gagcaaaagaaatccagagatatgaacataataattaacttgatgaaatggattcatata
atccatgaaaagcattcagaactattaaaaaatacagatcgacgaaaattagctaaatat
ttaaaatacgttggatttgacaacttggcacacgctttatatcctcaggtaggtgctata
gaaaatattattgctgagaaggatatttctaaatattcagtttgtatgggagcagctcgg
tttcagttaacatatatgggccattacttacttcgagaagaaagaagtgatccagatccc
agggtgcatcattttataccagacacatggcagagggaacttcttgacgtggtagataac
aatgaatctgctgtaattgttgccccaacatcatcagggaaaacctatgcttcttactac
tgcatggagaaaatcctgagagagagtgatgaaggggtgattgtgtatgttgctccaaca
aaggctcttgttaatcaagtggtaggaactatctgcagtctatttaccaaagcactgcca
aaaggactagtggtgtgtggagtgtttaccagagattaccgtcatgataccttgaattgt
cagatattggtgacagtgcctcagtgcttggaaatactcttgttatcacctcgtaatcaa
aagtgggtgaaaaggatgagatatgtcatcttcgatgaggttcactgccttgggggagaa
attggagccgaagtttgggagcatcttcttgttatgattcgatgtccctttctggcactt
tctgctactatcagtaatcctgaacatctcactgaatggttggtgttaattaaaagatac
tggcaagatgttgaaagcaaaatggaaaattctagttcattgcaaaatgtcttgaaagtt
tcaaagaaacaacaaagaaaaagaatagaaaagccatcctacagagttagactggtgtgg
tacacagagcgatacaatgatctagaaaagtatgtgtgttccctaaaggataatgagttt
atcattgaacactatcacccatgtgctgcacttacagtcaaccatataaagaagtatgga
atccctttagaccttggattttctccacgggaaagcatactgctttatgatgcgatggta
catgtttggccagaatggacaagaataaaagagttagaacctgaagaattcagctgcttc
aaaaataaaatagtcataacgagggcagatgctaagaaatatgaagaggaactgaaaaag
gaaataattcactggagtcatctggacccaagcaaggtgaatcagttattcatgtacctt
aagcctcaaacttttgacagtgcagaaattgaaaagcgaaggatgtttcctcattttgtg
gaaaaacttaaagaaatgaataggctgcctgcaatatttttttcgtattttaattcagat
tcaggtgctagaatacaaagaatcattttattagcagctgaaataaaggaaattaaaaaa
aaccttaagaaacattatgaaatttctccagactgtacttacactgaccgtacagttgtg
gattatcagactttagccaagatcctacgcagactgagaggaacaagacaaggctacaaa
ctacacggtctgttaaggcggggcattggatatcaccacggttcgatggaaatcagacaa
agacaagttgtagagatgcttttcagactgaagcacctcaaggtgataacagctacctcc
acccttgctttgggaattaacatgccatgtaaatctgttgtttttatggaagattctgtt
tttttggatgccttgaactttcgacagatgtctggtcgtgcaggaagacggggagaagat
cttataggaaatgtgttcttctatgatattccattacctaagatagaaaggctcttaaaa
tcgaatgtgcccaaactgaaaggtcaatttcctttaagtatatccttggttctcagactt
atgcttttagttgccaaagcagatgacaaggaggatgccaaagcaaaggcattgtcggtt
ctccaatattcattgatgtccttcaagcaaccaaagatcaattgcatgttaaagttttat
tttatatattctttgcaattcttggtcagagaggaatatctgaatctagaatgtattccc
attggttattctggtctcgtgtcacatttgcactaccatgaacctgcaaactttgtttta
gtaagcttgctgaagaaacgcttatttcacaagctgtgtgttccaaccaagataaaaggt
aagcacttttctgaagaagtgatggaaacattagtggtggtgttagcaaatctttttgga
agacattatcttcctccctgtgtgaaaaactttaaaaaggaattttctcattcagtggta
gttctagatgatcttcccaaggaatttgctgcagtggtaaaggaacacaacaccagaatt
caagagaattttggttccttcctcctaacaatttccaagttggctgacatgagaaaagaa
tcccaactacctctctcagaaattgacttttcaggtaaagaatgtgaagactctgaactg
gtttctcatttgatgcctgggaccgagagcagaactgcagtctccccatttgcttgcctg
tccaacataacagatcaagatttatttgatgttgatgtgataaatgatgctaagttacga
acaattgatgtgaatgttcaaaacatccctttcctttgcttgaataaatatgatacgaat
ggaaggaagtgtccattgaatggttatgtattgaacttctataaaaaccgttccctgtca
gcactaactttggataattggttaaatatgggagatgcttttactcttatcagggatttt
gcactgactgttcagtccatcaggatttcactgagtgaattatgtgatgatgaagatgac
aatgttctgttagcatttaaacagctgagtaaagcattccattcaatcttaggaaaaaaa
gcaatagactga
DBGET
integrated database retrieval system
