Myotis lucifugus (little brown bat): 102421179
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Entry
102421179 CDS
T07795
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X4
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
mlf
Myotis lucifugus (little brown bat)
Pathway
mlf04140
Autophagy - animal
mlf04148
Efferocytosis
mlf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102421179 (VPS39)
04148 Efferocytosis
102421179 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102421179 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mlf04131
]
102421179 (VPS39)
Membrane trafficking [BR:
mlf04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
102421179 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Diphthamide_syn
KCTD11_21_C
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
102421179
NCBI-ProteinID:
XP_006093126
Ensembl:
ENSMLUG00000000645
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDVVPAAVASPESGSCN
RFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF
TCDLQHIETGEEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVG
FKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADRKVAVGQDDLTVVLNEEGICTQKCA
LNWTDIPVAMEHQPPYIIAVLPRYVEIRTLEPRLLVQSIELQRPRFITSGGSNIIYVASN
HFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQK
RFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYL
TQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLL
RLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTV
QYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKGLA
IPYLEHVIHVWEETGSRFHNCLIQLYCEKVQGLMKEYLLAFPAGQTPVPAGEEEGELGEY
RRKLLMFLEISSYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTKMAE
EYCHKHYDQNKDGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHS
KLDTTKALNLLPANTQINEIRIFLEKVLEGNAQKKRFNQVLKNLLHAEFLRVQEERILHQ
QVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagccggtgccgatcctagaaaagctgcctctgcagatcgactgt
ctggctgcctgggaggaatggcttcttgttggaaccaaacaaggacatcttctcctctac
aggattcggaaggatgttgtgccagcagctgtggcatcacctgaaagtggcagctgcaac
aggtttgaagtgacactagagaaatccaataagaatttctccaaaaagattcagcagatc
catgtggtttcccagtttaagattctagtcagcttgttagaaaataatatttatgtccat
gacctattgacatttcaacaaatcactacggtttcaaaagcaaagggagcatcgctgttc
acatgtgacctccagcacatagagactggtgaggaggtgttgcggatgtgtgtagctgtg
aaaaagaagctgcagctctatttctggaaggacagggaatttcatgaattgcagggggac
tttagtgtaccagacgtgcccaagtccatggcatggtgtgaaaattctatctgtgtgggt
ttcaagagagactactacctcataagggtggatggaaaggggtccatcaaagagctcttc
ccaacaggaaagcagctggagcccttagttgcccctctggcagataggaaagtggccgtg
ggtcaggatgatctcaccgtggtgctcaatgaggaggggatctgcacacagaaatgcgcc
ctgaactggacggacataccagtggccatggagcaccagcctccctacatcattgcagtg
ttgcctcgatatgtggagatccgaacactcgagccaaggctcctggtccagagcattgaa
ttgcaaaggccccgtttcatcacttcaggaggatcaaacattatctatgtggccagcaat
cattttgtttggagacttattcctgtccccatggcaactcagatccaacagctgctccag
gacaaacagtttgaattggctttgcagcttgcagaaatgaaagatgattctgacagtgag
aagcaacagcagatccatcacatcaaaaacttgtatgccttcaacctcttctgccagaag
cgttttgatgagtccatgcaggtctttgctaagctcggcacagatcctacccatgtgatg
ggcctgtacccggacctgctgcccacagactacaggaagcagctgcagtatcctaacccc
ctgcctgtgctctccggggctgaattggagaaggctcacttagctctgattgactacctg
acacagaaacggagccagttggtaaagaagctgaatgactctgatcaccagtctagcact
tccccgctcatggaaggcactcccaccatcaaatccaagaagaagctgctgcagatcatc
gacaccaccctgctcaagtgctacctccataccaacgtggccctggtggcccccctgctg
cgcctggagaacaatcactgccacatcgaagagagcgagcacgtgctgaagaaggctcac
aagtacagtgagctcatcatcctgtacgagaagaaggggctccatgagaaagccctgcag
gtgctggtggaccagtccaagaaagcaaactcgccgctgaaaggccacgagaggacggtg
cagtatctgcaacatctgggcacagaaaacctgcatttgattttttcctactcggtgtgg
gtgctgagagacttcccagaggatggcctgaagatattcaccgaagacctcccggaggtg
gagtctctgccccgggaccgagtgctcggcttcctggtagagaattttaagggcctggct
attccttatctggagcacgtcatccacgtctgggaggagacgggctccaggttccacaac
tgcctgatccagctgtactgtgagaaggtgcaaggtctgatgaaggagtacctcctggcc
ttccctgcaggccaaactccagttcctgctggagaggaagagggtgagctgggagaatat
cgacggaagctccttatgttcttggaaatttccagctactacgacccgggccggctcatc
tgtgattttccttttgatggcctcttagaagaacgtgctctcctgctggggcgcatgggg
aaacatgaacaagctctcttcatctatgtccacatcctgaaggacacaaagatggctgag
gagtactgccacaagcattatgaccaaaacaaagatggcaacaaagatgtgtatctgtcc
ctgctccggatgtacctgtcgccccccagcgttcactgtctggggcccatcaagctggaa
ctgctggagccccaagccaacctccaggctgccctgcaggtcctcgagctgcaccacagc
aaactggacaccaccaaggccctcaacctcctgccagcgaatactcagattaacgagata
cgcatcttcctggaaaaggtcttggaaggaaatgcgcaaaagaaacggttcaatcaagtg
ctcaagaaccttctccatgcagagttcctgcgggtacaggaagagcggattttacaccag
caggtgaagtgcatcatcacggaggagaaggtgtgcatggtgtgtaagaagaagattggg
aacagcgcatttgcgaggtaccccaatggagtggtggtgcactacttctgttccaaagag
gtgaacccggcggacacctga
DBGET
integrated database retrieval system
