Myotis lucifugus (little brown bat): 102422686
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Entry
102422686 CDS
T07795
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mlf
Myotis lucifugus (little brown bat)
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlf03016
]
102422686
Enzymes [BR:
mlf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
102422686
Transfer RNA biogenesis [BR:
mlf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
102422686
Prokaryotic type
tRNA splicing ligases
102422686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Cu-oxidase_4
Motif
Other DBs
NCBI-GeneID:
102422686
NCBI-ProteinID:
XP_014312886
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MSCNYNDELQFLEKINKNCWRIKKGFVPNMQVEGIFYVNDALEKLMFEELRNACRGGGVG
GFLPAMKQIGNVAALPGIVHRSIGLPDVHSGYGFAIGNMAAFDMNDPEAVVSPGGVGFDI
NCGVRLLRTNIDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLEEALEMGVDWSL
REGYAWAEDKEHCEEYERMLQADPNKVSARAKKRGLPQLGTLGAGNHYAEIQVVDEIFNE
YAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVNDRQLACARIAS
PEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDLHVIYDVSHNIAKVEQ
HVVDGKERTLLVHRKGSTRAFPPHHPLIAVDYQLTGQPVLIGGTMGTCSYVLTGTEQGMT
ETFGTTCHGAGRALSRAKSRRNLDFRDVLDKLADMGIAIRVASPKLVMEEAPESYKNVMD
VVNTCHDAGISKKAIKLRPIAVIKG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagttgcaactacaacgatgagctgcagttcttggaaaagatcaataaaaactgttgg
agaatcaagaagggcttcgtgcccaacatgcaggttgaaggaattttctatgtaaatgat
gctctggaaaaattaatgtttgaggaattaaggaatgcgtgtcgaggtggcggtgttggt
ggcttcctgcctgccatgaaacaaattggcaatgtggcagccctgcctgggattgttcat
cgatctattgggcttcctgatgtccattcaggttatgggtttgctattgggaatatggca
gcctttgatatgaatgaccctgaagcagtggtgtccccaggtggtgtcggatttgacatc
aattgcggggttcgcttgctaagaaccaatatagatgaaagcgatgtccagcctgtgaag
gagcaacttgcccaagctatgtttgaccacatccctgttggggtgggatccaaaggtgtc
atcccaatgaatgccaaagacttggaagaggccttggagatgggtgtggactggtcgcta
agagaaggctacgcctgggctgaagacaaggagcactgtgaggagtatgaaagaatgctg
caagctgaccccaataaggtctctgcaagggcgaaaaaaagaggccttcctcagttgggg
accctgggagcaggtaaccactatgcagaaatccaagttgtagatgagattttcaatgaa
tatgctgctaagaagatgggcatcgaccataaaggacaggtgtgcgtgatgatccacagt
ggaagcagaggcttgggccaccaagtagccacagatgccctggttgctatggaaaaagcc
atgaagagagacaagattatagtcaatgaccgtcagttggcttgtgctcgaatcgcttct
ccagagggtcaggactacctgaagggaatggcagcagctgggaactatgcctgggtcaac
cgctcttccatgaccttcttaacccgtcaggcttttgccaaggtattcaacacaacccct
gatgacttggacctacacgtcatctatgatgtttctcacaatatcgccaaagtggaacag
cacgtggtggatggaaaggagcggaccctgttagtacacaggaagggatccacccgagct
ttccctcctcaccatcccctcattgctgttgattaccaactcactggacaaccagtgctc
attggtggcaccatgggaacctgtagttacgttcttactggcactgagcagggcatgact
gagacctttgggacaacctgccatggagcgggccgtgcattgtcccgagcaaaatctcga
cgtaacttagatttccgggacgtcttagacaaattggcagatatgggaattgcaattcgt
gttgcctcacccaaactggttatggaagaggctcctgagtcctataagaacgtgatggat
gttgtgaacacctgccatgatgctggaatcagcaagaaggccattaaactgagaccgatt
gctgttatcaaagggtag
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