Myotis lucifugus (little brown bat): 102423242
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Entry
102423242 CDS
T07795
Symbol
CHD4
Name
(RefSeq) LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 4
KO
K11643
chromodomain-helicase-DNA-binding protein 4 [EC:5.6.2.-]
Organism
mlf
Myotis lucifugus (little brown bat)
Pathway
mlf03082
ATP-dependent chromatin remodeling
mlf05165
Human papillomavirus infection
mlf05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102423242 (CHD4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
102423242 (CHD4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
102423242 (CHD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mlf03036
]
102423242 (CHD4)
Chromosome and associated proteins [BR:
mlf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
102423242 (CHD4)
Chromatin remodeling factors
NuRD complex
102423242 (CHD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
ResIII
HDA2-3
PHD_2
DEAD
zf-PHD-like
Motif
Other DBs
NCBI-GeneID:
102423242
NCBI-ProteinID:
XP_014307097
Ensembl:
ENSMLUG00000014343
LinkDB
All DBs
Position
Unknown
AA seq
1905 aa
AA seq
DB search
MASGLGSPSPCSAGSEEEDMDALLNNSLPPPHPENEEDPEEDLSEAETPKLKKKKKPKKP
RDPKIPKSKRQKKELGDSSGEGPEFVEEEEEVALRSDSEGSDYTPGKKKKKKLGPKKEKK
SKSKRKEEEEEDDDDDDSKEPKSSAQLLEDWGMEDIDHVFSEEDYRTLTNYKAFSQFVRP
LIAAKNPKIAVSKMMMVLGAKWREFSTNNPFKGSSGASVAAAAAAAVAVVESMVTATEVV
PPPPPVEVPIRKAKTKEGKGPNARRKPKGSPRIPDAKKPKPKKVAPLKIKLGGFGSKRKR
SSSEDDDLDVESDFDDASINSYSVSDGSTSRSSRSRKKLRTTKKKKKGEEEVTAMDGYET
DHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKEDN
SEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGE
WLCPRCTCPALKGKVQKILIWKWGQPPSPTPVPRPPDADPNTPSPKPLEGRPERQFFVKW
QGMSYWHCSWVSELQLELHCQVMFRNYQRKNDMDEPXSGDFGGDEEKSRKRKNKDPKFAE
MEERFYRYGIKPEWMMIHRILNHSVDKKGHVHYLIKWRDLPYDQASWESEDVEIQDYDLF
KQSYWNHRELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLH
PYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTI
INWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVKFHV
LLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTPLQN
NLEELFHLLNFLTPERFHNLEGFLEEFADIAKEDQIKKLHDMLGPHMLRRLKADVFKNMP
SKTELIVRVELSPMQKKYYKYILTRNFEALNARGGGNQVSLLNVVMDLKKCCNHPYLFPV
AAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLE
HEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSD
WNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGSKT
GSMSKQELDDILKFGTEELFKDEATDGGGDNKEGEDSSVIHYDDKAIERLLDRNQDETED
TELQGMNEYLSSFKVAQYVVREEEMGEEEEVEREIIKQEESVDPDYWEKLLRHHYEQQQE
DLARNLGKGKRIRKQVNYNDGSQEDRDWQDDQSDNQSDYSVASEEGDEDFDERSEAPRRP
SRKGLRNDKDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRYGMPPQDAFTTQWLVRD
LRGKSEKEFKAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLIRKKVQ
EFEHVNGRWSMPELAEVEENKKMSQPGSPSPKTPTPSTPGDTQPNTPAPAPPAEDGVKIE
ENSLKEEESTEGEKEVKSAAPEAAVECPQPPAPALEDEKVLVEPPEGEEKVEKAEVKERT
EEPMETESKGVADVEKVEEKSAIDLTPIVVEDKEEKKEEEEKKEVMLQNGETPKDLTDEK
QKKNIKQRFMFNIADGGFTELHSLWQNEERAATVTKKTYEIWHRRHDYWLLAGIINHGYA
RWQDIQNDPRYAILNEPFKGEMNRGNFLEIKNKFLARRFKLLEQALVIEEQLRRAAYLNM
SEDPSHPSMALNTRFAEVECLAESHQHLSKESMAGNKPANAVLHKVLKQLEELLSDMKAD
VTRLPATIARIPPVAVRLQMSERNILSRLANRAPEPTPQQVAQQQ
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggcctgggctctccgtccccctgctcggcgggcagcgaagaggaggatatg
gatgcacttttgaacaacagcctgcccccaccccacccagaaaacgaagaggacccagaa
gaggatttgtcagaagcagagactccaaagctcaagaagaagaagaaacctaagaaacct
cgggaccctaaaatccctaagagcaagcgccaaaaaaaggagctgggggacagctctggg
gaggggccagagtttgtggaggaggaggaagaggtggctctgcgctcagacagtgagggc
agcgactatacccctggcaagaagaagaaaaagaagcttggacccaagaaagaaaaaaaa
agcaaatccaagcggaaggaggaagaggaggaggatgacgatgatgatgattcaaaggag
cctaaatcatctgctcagcttctggaagactggggcatggaagacattgaccatgtgttc
tccgaggaggattatcgcaccctcaccaactataaggccttcagccagtttgtccgaccc
ctcattgctgccaaaaaccccaagattgctgtctccaagatgatgatggttttgggtgcg
aagtggcgggaattcagcaccaacaaccccttcaaaggcagttctggggcttcagtggca
gcagcagcagctgcagcagtggctgtggtggagagcatggtgaccgctactgaagttgta
ccacctcctcccccggtggaggtgcctatccgcaaggccaagaccaaggagggcaaaggt
cccaatgctcggaggaagcccaaaggcagtcctcggatacctgatgccaagaagcctaaa
cccaaaaaagtggctcccctgaaaatcaagctgggaggttttggttctaagcgtaagaga
tcctcgagtgaggatgacgacttagatgtagaatctgacttcgatgatgccagtatcaac
agctattctgtttctgatggttccaccagccgtagtagccgcagccgcaagaaacttcga
actactaaaaagaaaaagaaaggcgaggaggaggtgactgctatggatggttatgagaca
gaccaccaggactattgcgaggtgtgccagcaaggcggcgagatcatcctgtgtgatacc
tgtccccgagcttaccacatggtgtgcctggatccggatatggagaaggctccggagggc
aagtggagctgcccacactgtgagaaggaaggcatccagtgggaggctaaagaggataat
tcggagggtgaggagatcctggaagaagttgggggagaccctgaagaggaggatgaccac
catatggaattctgccgggtctgcaaggatggtggggaactgctctgctgtgacacctgt
ccttcttcctaccatatccattgcctcaaccccccgcttccagagatccccaatggcgag
tggctctgtccccgttgcacgtgtccagctcttaagggcaaagtccagaagatcctaatc
tggaagtggggtcagccaccatctcccacaccagtgcctcggcctccagatgcggatccc
aatactccctcccctaagcccttggaggggcgcccagagcgacagttctttgtgaaatgg
caaggcatgtcttattggcactgctcctgggtgtctgaactgcagttggagctgcactgt
caagtgatgttccgaaactatcagcggaagaatgatatggatgagccancttctggggat
tttggtggtgacgaagagaagagccgaaagcgaaagaacaaggaccctaaatttgcagag
atggaggaacgcttctatcgctatgggataaaacctgagtggatgatgatccaccgaatt
ctcaaccacagtgtggacaagaagggccatgtccactacttgatcaagtggcgggacttg
ccttatgaccaggcatcctgggagagtgaggatgtggagatacaggactatgacttgttc
aagcagagctattggaatcacagggagttaatgaggggcgaagaagggcggccaggcaag
aagctcaagaaggtgaagctgaggaagttggagcggccgccggagactccaacagtcgat
ccaacagtgaagtatgagcgacagccagagtacctggatgccacaggtggaaccctgcac
ccgtatcaaatggagggcttgaattggttgcgtttctcctgggctcagggcacagatacc
atcttggctgatgagatgggccttgggaaaactgtccagacagcagtcttcctgtattct
ctctacaaggagggtcattccaaaggccccttcctagtgagtgcccctctttctaccatc
atcaactgggagcgggagtttgaaatgtgggctccagatatgtatgtggtgacttatgtg
ggcgacaaagacagccgggccatcatccgagaaaatgagttctcttttgaagacaacgcc
attcgtggtggcaagaaggcctctcgcatgaagaaagaggcatctgtgaagttccatgtg
ctgctgacgtcctatgagttgatcaccattgacatggctatcttgggctctattgactgg
gcctgcctcattgtggatgaagcccatcggctcaagaacaatcagtctaagttcttccgg
gtcttaaatggttactcactccagcataagctgctgctgactgggactccattacaaaac
aatctggaagagctgtttcatctgctcaactttctcacccctgagaggttccacaatttg
gaaggcttcttggaggagtttgctgacattgccaaggaggatcagattaaaaaactgcat
gacatgctggggcctcacatgttgcggcggctcaaagctgatgtgttcaagaatatgcca
tctaagacagagctgattgtgcgtgtggaactgagccctatgcaaaagaaatactacaag
tacatcctcactcgaaattttgaagcactcaatgctcgaggtggtggcaaccaggtctct
ctgctgaatgtggtgatggatcttaagaagtgctgcaaccacccatatctctttcccgtg
gctgcaatggaagcccctaagatgcctaatggcatgtatgatggcagtgccctaatcaga
gcatctgggaaattattgcttctacagaagatgctcaagaaccttaaggagggtgggcac
cgtgtactcatcttctcccagatgaccaagatgctggacctgctagaggattttttggaa
catgaaggttataaatatgaacgtattgatggtggaatcactgggaacatgcgtcaagag
gccattgaccgcttcaacgcaccgggtgctcaacagttctgcttcttgctttccactcga
gctgggggccttggaataaatttggccactgctgacacagtcattatctatgactctgac
tggaaccctcataatgacattcaggcctttagcagagctcaccgtattgggcaaaataag
aaggtgatgatctatcggtttgtgacccgtgcgtcagtggaggagcgtatcacgcaggtg
gctaaaaagaagatgatgctgacgcatctagtggttcggcctgggctgggctccaagact
ggatccatgtccaaacaggagcttgatgacatcctcaagtttggcactgaggaattattc
aaggatgaagccacagatggaggaggagacaacaaagagggagaggatagcagtgttatc
cactatgatgataaggccattgaacgactgctggaccgtaaccaggatgagactgaagac
acagaattgcagggcatgaatgaatatttgagctcattcaaagtggcccagtatgtagtg
cgggaagaagaaatgggggaggaagaggaggtagaacgggaaatcataaaacaggaagaa
agtgtggatcctgactactgggaaaaattgctgcggcaccattatgagcagcagcaagaa
gatttggcccgaaatctgggcaaaggaaaaagaatccgtaaacaggtcaactacaatgat
ggctcgcaggaggaccgagattggcaggacgaccagtccgacaaccagtccgattattca
gtggcctcagaggaaggtgatgaagactttgatgaacgttcagaagctccccgcaggccc
agtcgcaagggcctgcggaatgataaagataagccattgcctcctctgttggcccgtgtg
ggtgggaatattgaagtacttggttttaatgctcggcagcgaaaagcctttcttaatgca
attatgcgatatgggatgccacctcaggatgcttttaccactcagtggcttgtgagagat
ctgcgaggcaaatcggagaaagagttcaaggcttacgtctctctttttatgcggcattta
tgtgagccaggagcagatggggctgagacctttgctgatggtgtcccccgagaaggcctg
tctcgccagcatgttcttactaggattggtgtcatgtccttgattcgcaagaaggttcag
gagtttgagcatgttaatgggcgctggagtatgcctgaactcgctgaagtagaggaaaac
aagaaaatgtcccagccagggtcaccttccccaaagacacctacaccctctactccaggg
gacacacaacccaatactcctgcacctgccccaccggctgaggatggggtaaaaatagag
gaaaacagcctcaaagaagaagagagtacagaaggagaaaaggaggttaaatctgcagca
cccgaggccgctgttgagtgtccacagccccctgcccctgccttggaggatgaaaaggtc
cttgttgaacctcctgagggagaggagaaagtagaaaaggcagaggtgaaggagaggaca
gaggaacccatggagacagaatccaaaggtgttgctgatgtggagaaagtggaggagaag
tcagcaatagatctgactcccattgtggtggaggacaaagaagagaagaaagaagaagaa
gagaaaaaagaggtgatgcttcagaatggagagactcccaaggacctgactgatgagaag
caaaaaaaaaacattaaacagcgattcatgttcaacattgcagatggtggttttactgag
ttgcactccctttggcagaatgaagagcgtgcagccacagtcaccaagaagacttacgag
atctggcatcgacggcatgactactggttgctggctggcatcataaatcatggctatgcc
cggtggcaggacatccagaatgacccacgttatgccatcctcaatgagcctttcaagggt
gaaatgaaccgtggcaatttcttagagatcaagaataaatttctagcacgaaggtttaag
cttctagaacaagccctggtcattgaggaacagcttcggcgggcagcttacctgaacatg
tcagaggacccttctcacccttccatggccctaaatacccgctttgctgaggtggagtgt
ttggcagagagtcatcaacacttgtccaaggagtcaatggcaggaaacaagcctgccaat
gcggtcctgcacaaagttctgaaacagctagaagaactgctgagtgacatgaaagctgat
gtgactcgactcccagctactattgcccggattcccccagttgcggtgaggctacagatg
tcagagcgtaacattctcagccgcctggcaaaccgagcacctgaacctactccacagcag
gttgcccagcagcagtga
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integrated database retrieval system
