Myotis lucifugus (little brown bat): 102423676
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Entry
102423676 CDS
T07795
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mlf
Myotis lucifugus (little brown bat)
Pathway
mlf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102423676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlf03019
]
102423676
03041 Spliceosome [BR:
mlf03041
]
102423676
Messenger RNA biogenesis [BR:
mlf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102423676
Spliceosome [BR:
mlf03041
]
Complex B
Other components
Prp19-related factors
102423676
Complex C
102423676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_M
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_C
HAT_PRP39_N
TPR_12
TPR_2
TPR_8
TPR_19
Suf
ARM_TT21_C
ARM_TT21
TPR_15
TPR_7
TPR_1
RPN7
TPR_MalT
PPR
Motif
Other DBs
NCBI-GeneID:
102423676
NCBI-ProteinID:
XP_006107698
Ensembl:
ENSMLUG00000011021
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MVVMARLSRQERPDLVFDEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
VDQGRITHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTGFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETTSELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKV
RRAHQEIPDSSVPTLIQCWPLSYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKL
LEQRAEQLAAEAEHDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMD
LEPNEVRLEQQSVPAAVFGSLKED
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgactttcgcggcaggagcggccggaccttgtctttgatgaagaa
gacctcccctatgaggaggaaattatgcggaaccagttttctgtcaaatgctggctccgc
tacattgagttcaagcagggggccccgaagcccaggctcaatcagttgtacgagcgagcg
ctgaagctgctgccctgcagctacaaactctggtaccgctacctgaaagcacgcagggcc
caggtgaagcatcgctgtgtgactgatcctgcctatgaagatgtcaacaactgccacgag
agggccttcgttttcatgcacaagatgccacgtctatggctggattattgtcagttcttg
gtggaccagggccgtatcactcacacacgccgcactttcgaccgtgccctgcgggcgctg
cctatcacacagcactctcgtatttggcctctgtacttgcgcttcctgcgctcacaccca
ctacctgagacagctgtgcggggctaccggcgcttcctcaagctgagccctgagagcgca
gaggaatacatcgagtacctcaagtcaagtgaccggctggacgaggctgcacagcgcctg
gccaccgtggtgaatgatgagcgcttcgtctccaaggctggcaagtccaactaccagctg
tggcacgagctctgtgacctcatctcccagaacccagacaaggtgcagtcgctcaacgtg
gacgccatcatccgagggggccttaccggcttcacagaccagctgggcaagctctggtgt
tcactggccgactactacatccgcagtggccattttgagaaggctcgggacgtgtacgag
gaggccatccggaccgtgatgaccgtgcgggacttcacccaggtgtttgacagctatgcc
cagttcgaggagagcatgattgcagcgaagatggagaccacctcggagctggggcgggaa
gaagaggatgacgtggacttggaactgcgcctggcccgctttgagcagctgatcagtcgg
cggcccctgctcctcaacagcgtcttgctgcgccagaacccgcaccatgtccatgagtgg
cacaagcgtgtggccctgcaccagggccgcccccgggagatcatcaacacgtacacggag
gctgtgcagacagtggaccccttcaaggctacgggcaaaccccatacgctgtgggttgca
tttgccaagttttatgaggacaacgggcagctggatgatgcccgcatcatcctggagaag
gccaccaaggtgagcttcaagcaagtggatgacctggcaagtgtgtggtgcgagtgtggt
gagctggagctccggcacgagaattacgaccaggccttgcggctgctgcggaaggcaaca
gcactgcccgcccgccgggctgagtattttgacggctcggagcctgtgcagaaccgtgtg
tacaaatcattaaaggtgtggtccatgcttgccgacttggaggagagccttggcaccttt
cagtccaccaaggctgtgtatgaccgtattctggacctgcgcatcgctaccccccagatc
gtcatcaactacgccatgttcctggaggagcacaagtacttcgaggagagcttcaaggtg
aggagagcccatcaggagatcccagacagcagtgtccctaccctcattcagtgctggccc
ctgtcttacaacacacaggtcaacttcatggcctcgcagatgctcaaggtgtcgggcagt
gcgacaggcactgtgtccgaccttgcccccgggcagagtggcatggatgacatgaagcta
ctagagcagcgggcagagcagctggcagccgaggccgagcacgaccagcccccacgggcc
cagagcaagatcctgttcgtgaggagcgatgcgtcccgggaggaactggctgagctagcg
caacaggccaacccggaggagatcgagctgggggaggacgaggacgaggacgagatggac
ctggagcccaatgaggtgcggctggagcagcaaagtgtgccggctgctgtgtttgggagc
ctgaaggaagactga
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