Myotis lucifugus (little brown bat): 102425152
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Entry
102425152 CDS
T07795
Symbol
RTCB
Name
(RefSeq) tRNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mlf
Myotis lucifugus (little brown bat)
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlf03016
]
102425152 (RTCB)
Enzymes [BR:
mlf01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
102425152 (RTCB)
Transfer RNA biogenesis [BR:
mlf03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
102425152 (RTCB)
Prokaryotic type
tRNA splicing ligases
102425152 (RTCB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Cu-oxidase_4
Motif
Other DBs
NCBI-GeneID:
102425152
NCBI-ProteinID:
XP_014314611
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MSRNYNDELQFLEKINKNCWRIKKGFVPNMQRSIGLPDVHSGYGFAIGNMAAFDMNDPEA
VVSPGGVGFDINCGVRLLRTNLDESDVQPVKEQLAQAMFDHIPVGVGSKGVIPMNAKDLE
EALEMGVDWSLREGYAWAEDKEHCEEYGRMLQADPNKVSARAKKRGLPQLGTLGAGNHYA
EIQVVDEIFNEYAAKKMGIDHKGQVCVMIHSGSRGLGHQVATDALVAMEKAMKRDKIIVN
DRQLACARIASPEGQDYLKGMAAAGNYAWVNRSSMTFLTRQAFAKVFNTTPDDLDLHVIY
DVSHNIAKVEQHVVDGKERTLLLTGQPVLIGGTMGTCSYVLTGTEQGMTETFGTTCHGAA
PESYKNVTDVVNTCHDAGISKKAIKLRPIAVIKG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcaactacaacgatgagctgcagttcttggaaaagatcaataaaaactgctgg
agaatcaaaaagggcttcgtgcctaacatgcagcgatctattgggcttcctgatgtccat
tcaggttatgggtttgctattgggaatatggcagcctttgatatgaatgaccctgaagca
gtggtgtccccaggtggtgtcggatttgacatcaattgcggggttcgcttgctaagaacc
aatttagatgaaagcgatgtccagcctgtgaaggagcaacttgcccaagctatgtttgac
cacatccctgttggggtgggatccaaaggtgtcatcccaatgaatgccaaagacttggaa
gaggccttggagatgggtgtggactggtcgctaagagaaggctacgcctgggctgaagac
aaggagcactgtgaggagtatgggagaatgctgcaagctgaccccaataaggtctctgcg
agggcgaaaaaaagaggccttcctcagttggggaccctgggagcaggtaaccactatgca
gaaatccaagttgtagatgagattttcaatgagtatgctgctaagaagatgggcatcgac
cataaaggacaggtgtgcgtgatgatccacagtggaagcagaggcttgggccaccaagta
gccacagatgccctggttgctatggaaaaagccatgaagagagacaagattatagtcaat
gaccgtcagttggcttgtgctcgaatcgcttctccagagggtcaggactacctgaaggga
atggcagcagctgggaactatgcctgggtcaaccgctcttccatgaccttcttaacccgt
caggcttttgccaaggtattcaacacaacccctgatgacttggacctacacgtcatctat
gatgtttctcacaatatcgccaaagtggaacagcacgtggtggatggaaaggagcggacc
ctgttactcactggacaaccagtgctcattggtggcaccatgggaacctgtagttacgtt
cttactggcactgagcagggcatgactgagacctttgggacaacctgccatggagcggct
cctgagtcctataagaacgtgacggatgttgtgaacacctgccatgatgctggaatcagc
aagaaggccattaaactgagaccgattgctgttatcaaagggtag
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