Myotis lucifugus (little brown bat): 102425232
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Entry
102425232 CDS
T07795
Symbol
SCAF4
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
mlf
Myotis lucifugus (little brown bat)
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlf03021
]
102425232 (SCAF4)
03041 Spliceosome [BR:
mlf03041
]
102425232 (SCAF4)
Transcription machinery [BR:
mlf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102425232 (SCAF4)
Spliceosome [BR:
mlf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
102425232 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102425232
NCBI-ProteinID:
XP_023604132
LinkDB
All DBs
Position
Unknown
AA seq
1194 aa
AA seq
DB search
RGVHDKGHGAETTPHCWWRKRPRASRRQPCQHLDFSESLASKTGSRNGVILLPGGHWCLQ
RSSDLPESSHVWNQFPNQLFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIK
KCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVR
VLNLWQKNGVFKIEIIQPLLDMAAGSSSAVPGADSVANNEGSPPPPVKVSSEPPLVTTNS
VPSVQQLPSSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPAIDNAVMAQVQAITAQ
LTTTPAPPPEQKATAFDKKLLDRFDYDDEPEAVEESKKEDAAAAAASTTSAAAAPAAAPA
PPAAAVPAASPPQAPFGYPGDGMQQPAYTQHQNMDPFQPPMMAMQQDPVHHQVPLPPNGQ
MPGFSLLPPPAFPALAPPVLPPAAPVQQPFQAPFPAPSEPLAQKAQQEMKVEQPCIQEVK
RHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDRE
KERERRQKGLPPVKSETASVCSTTXWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGC
AYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYVPWD
KVKPEELEGFCEGGMLDSDTLNPEWKGITKKHENEVAQNGGAESSHAEPVSPIPKPLPVP
VPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPTFTPPLGIPPPGFGPGVPPPPPPPPFL
RPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPMSIPNSTIAGISEDPTKDLPIGNPI
PTVVSGARGNAESGDGVKMYGSAAPPAAPTSLPTPPVTQPVSLLASEQLVHPLLAFQVRK
LVAPGPVIGLQAPSTGLLGARPGLIPLQXPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPP
GPGGFGCPRPHGMKGPFPHHTAGPLVRPGGMPGLGNPGGPEDRDGRQQQQQAXPPTQPQQ
PPPAQQQPPTQQPQPFRNDSRQQQFSSGRDQERFGRRSFGNRVDSERDRYGSRGDERENS
GRERREWGRRSPERDRHRDAEDRGRRAGGHRDRERDSRDRESRREKEEARAKEKAEGADR
AAEPPPTQAGSADPAPDLAKGAPEPAPAPPAEERPAEATSPADPEKDPSAAEAR
NT seq
3587 nt
NT seq
+upstream
nt +downstream
nt
gcaggggagtccatgacaagggtcacggagcagagacaacaccacactgctggtggagga
agaggccccgagcctcccgaaggcagccctgccagcaccttgactttagtgagagtctgg
cctccaaaaccggcagtagaaacggagtcatccttctgcctggaggacactggtgcttac
agaggtcaagcgatttgccagaatcatcacatgtttggaaccagtttccaaaccagctct
tttcacttatggatatgaaacctcccatctctcgagccaagatgattctcatcacaaaag
ctgctattaaagccattaagctttataagcatgtagttcaaatagtagaaaagttcatca
aaaagtgtaaaccagaatacaaggttccagggttatatgtaatcgactcaattgtacgac
agtctcgtcaccagtttggaactgataaagatgtttttgggccaagattctctaaaaaca
taaccgccacattccaatatttatatctttgtccatctgaagataagagtaaaatagtcc
gtgtgctgaacctttggcaaaaaaatggagtctttaaaattgaaattatccagccccttc
tggacatggctgcggggagcagcagcgccgtcccgggggccgacagcgtcgctaacaatg
aaggttcgccgcctcctccagttaaagtttcttctgaacccccactggtcactacaaact
ccgtgccatccgtccagcagctgcccagttcggacgcttttgctgccgtggcccagctgt
ttcagacgacccaagggcaacagcttcagcagatccttcagacttttcagcagcctccaa
aaccacagtctcccgccattgacaatgctgtgatggctcaggttcaggccatcacagctc
agttaacgacaactccggcaccaccgcctgagcagaaggccacggcgtttgacaagaagc
tacttgatcgatttgattatgacgatgagccagaagctgtggaagaatcgaagaaagaag
atgctgctgccgctgctgccagtaccacctctgctgctgccgcacctgctgctgccccgg
ccccacccgctgctgccgtgcccgctgcgtctccaccgcaggcgccctttgggtatcctg
gagatggcatgcagcaaccagcgtatacccaacatcagaacatggatccgtttcagccgc
cgatgatggcaatgcaacaggacccagtgcaccatcaggttccacttcctcctaatggac
agatgccggggttcagccttctgcccccgcctgcgttccccgccctggctccgcctgtgc
ttcctcccgctgcccccgtgcagcagccgttccaggcccccttcccggcccccagtgagc
cgctcgcacagaaagcccagcaggaaatgaaagtagaacagccttgtattcaagaggtga
agcggcatatgtctgataacagaaagtcgagatctaggtcagcatccaggtcaccaaaaa
ggaggcgctctcgatctggctctagatctcgacggtctcggcatcgacgctctcgatctc
ggtcccgggacagacgccgccattctcctcgctctcgatcccaagaaagacgggaccgag
agaaagagagagagcgccggcagaaaggccttcctcccgtcaagtccgagaccgcgagcg
tttgtagcactaccntctgggtgggacagctggacaaaaggacgactcagcaggacgtgg
ccagtctcttagaagagtttggtccaattgaatcaattaatatgattcctcccagaggct
gtgcctacattgtcatggtgcacaggcaagacgcctaccgcgccctgcagaagctgagcc
gagggaactataaagtgaaccagaagtccataaagatcgcctgggccttaaacaaaggca
tcaaggcggactacaagcagtactgggacgtggagctgggtgtgacctacgttccttggg
acaaagtgaagcctgaggagctggagggcttttgtgaaggaggcatgttggacagcgaca
cgcttaacccagagtggaaaggaattaccaagaagcatgagaatgaagttgctcagaatg
gaggggcagaaagctcacatgcagaaccagtgtcacccatacccaagcctttgccggtgc
ccgtccctcctattcccgtccccgcgcctatcacagtacctcctccacaggtccccccac
atcagccggggcctcctgtggttggtgctctccagccgcccacgttcacgccgcctctgg
gaattccgccgccgggcttcggtcctggcgttcctccgccgcctcctcctccaccctttt
tacgcccaggattcaacccaatgcatttaccaccaggttttcttcctcccggacccccac
ctcctataactccacccgtgtccattcctcctcctcacactccaccaatgagcatcccaa
actctactatcgctggtataagcgaagaccccaccaaagacttacctattggaaatccca
ttccaacagtggtgtctggggctagaggaaacgccgagtctggtgacggtgtgaaaatgt
acggctctgccgcgccgcccgccgcgcccacgagtctgcccacccctccggtcacccagc
ctgtctcgcttctggctagtgaacagctggttcaccctctccttgcctttcaggttcgca
agttagttgcgcccgggcctgtgattgggctccaggcgccgtccacgggcctcctcgggg
cgcggcccgggctgatccccctgcagncgccgccgggaatgcctccgcctcacctgcagc
gcttccctctgatgccgccccgccccatgccgccccacatgatgcaccggggcccgccgc
ccggaccagggggctttggatgcccccgcccccatggaatgaaaggcccctttccccacc
acacggctggccccttagtgcggcccggtggcatgccggggctcgggaacccggggggcc
ctgaagacagagacgggaggcagcagcagcagcaagccntgccgccaacgcagccccagc
agccgccgccagcccagcagcagccccccacgcagcagccgcagccgttcaggaatgaca
gccggcagcagcagttcagttcagggagagaccaagagaggtttggaaggaggtccttcg
gaaatagggtggacagcgagcgggaccgctacgggagccgcggcgacgagagggagaaca
gcggccgggagaggagagagtggggacggaggagccctgagcgggacagacacagagacg
cggaggacagaggccggcgggctggcgggcaccgcgaccgagagagagattcgagggata
gagagtcccgcagagagaaggaggaggcccgggccaaggagaaggccgagggggccgaca
gggccgccgagccgcccccgacccaggcggggagcgcagacccagccccggacctcgcca
agggggcgcctgagccggcgcctgccccgcctgctgaagagcggcccgcagaggctacct
cacccgcagaccccgagaaggacccctcggcggccgaggcccgctaa
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