Myotis lucifugus (little brown bat): 102427204
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Entry
102427204 CDS
T07795
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
mlf
Myotis lucifugus (little brown bat)
Pathway
mlf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102427204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlf03019
]
102427204
Enzymes [BR:
mlf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
102427204
Messenger RNA biogenesis [BR:
mlf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
102427204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
T6PP_C
NCBP3
Motif
Other DBs
NCBI-GeneID:
102427204
NCBI-ProteinID:
XP_023602053
Ensembl:
ENSMLUG00000005414
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MEIIRSNFKSHLHKVYQAIEEADFFAIDGEFSGISDGPSVTTLTNGFDTPEERYQKLKKH
SMDFLLFQFGLCAFKYDCIHSKYIIKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSNGAGALSYVSPNTSKCPVTIPEDQKKF
IDQVVEKIEDLLQSEENKNLDLDPCTGFQRKLIYQTLNWKYPKGIHVETLETEKKERYIV
VSKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLIIGHNMLLDVMHTVHQF
CCPLPEELNEFKEMTTSVFPKLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFISMTNYLGSFLSPPKNHVSARSKLIEPFIN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQVSWIDDTS
AFVSLSQPEQVQIGKCFGHCFVH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtcatcttcacaaagtgtaccaggccatagag
gaggcggacttctttgccatcgatggggagttttcaggaatcagtgatggaccttcagtc
accacattaacaaatggttttgacactccggaagagaggtaccagaagctcaaaaagcat
tccatggactttttgctgtttcaatttggcctttgcgcttttaagtatgactgcatacat
tcaaagtatataataaagtcatttaacttctatgttttcccgaaacccttcaatagatcc
tcaccagatgtcaaatttgtttgtcagagctcaagcattgactttttagcaagccaagga
tttgatttcaataaagttttccgcaatggaattccatatttaaatcaggaagaagaaaga
cagttaagagagcagtatgatgaaaaacgtttacagtccaatggtgcaggagctctatca
tatgtgtctcctaacacatccaagtgtcctgtgacgattcctgaggatcagaagaagttt
attgaccaagtggtagagaaaatagaagatttgttacaaagtgaagaaaataagaacttg
gacttagacccatgcacggggttccaaagaaaactaatttatcaaactttgaactggaag
tatcccaaaggcattcatgttgagactttagaaactgaaaagaaagagcgatacatagtt
gtcagcaaagtagatgaagaagaacgcaaaagaagagagcagcagaaacatgctaaagaa
caggaagaactgaatgatgctgtgggattttctagagtcattcatgccattgctaattcg
ggaaaacttattattggacacaatatgctcttggatgttatgcacacagttcatcagttc
tgctgtcctctgcctgaggaattaaatgaatttaaggagatgacaacatctgttttcccc
aagctcttggatactaaattgatggccagcacacaaccttttaaggatatcattaataac
acatcccttgcagaattggaaaagcggttaaaagagacaccttttaaccctcctaaagtt
gaaagtgcagaaggttttccaagttatgacacagcttctgaacagctccatgaggcagga
tatgatgcttatatcacaggactgtgtttcatctccatgacaaattacctaggttctttt
cttagtcctccaaaaaatcatgtgtctgccagatcaaaactcattgaaccctttatcaat
aagttatttcttatgagagtcatggatattccctatctaaacttggaaggcccagactta
caacctaaacgtgatcatgttctccatgtgacattccccaaagaatggaaaaccagtgac
ctttaccagctttttagtgcctttggaaacattcaggtatcatggattgatgacacgtca
gcatttgtttctctcagtcagcctgagcaagtacaaattggtaagtgttttggacattgt
tttgttcattaa
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