Myotis lucifugus (little brown bat): 102427873
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Entry
102427873 CDS
T07795
Symbol
PDCD11
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
mlf
Myotis lucifugus (little brown bat)
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mlf03009
]
102427873 (PDCD11)
Ribosome biogenesis [BR:
mlf03009
]
Eukaryotic type
90S particles
Other 90S particles
102427873 (PDCD11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
OB_RRP5_4th
Suf
TPR_14
OB_RRP5
TPR_19
ARM_TT21
UTP6_C
TPR_CcmH_CycH
TPR_15
ARM_TT21_5th
TPR_16
DUF7017
DUF2110
Motif
Other DBs
NCBI-GeneID:
102427873
NCBI-ProteinID:
XP_014317316
Ensembl:
ENSMLUG00000004997
LinkDB
All DBs
Position
Unknown
AA seq
1932 aa
AA seq
DB search
MQSQGLRELLGVEPAHTSGRAASAWAVPGLLRTCDYSGAASEVEAGRRREAGNPTIATME
ESFPRGGTRKTHKSEIAPQQSVEQDNLFDVSTEEESIKRKKSQKGPAKTKKLKIEKRESS
KSIEEKFEILSIESLYEGMRILGCVKEVNELELVISLPNGLQGFVQVTEISDAYTKKLNE
QVEQEEPLKDLASLPELFSPGMLVRCVVSSLGITEKGKKSVKLSLNPQNVNKVLSAEALK
PGMLLTGTVSSLEDHGYLVDIGVGGARAFLPLQKAQEYIRQKNKGAKLKVGQYLHCVIKE
VKGNGGVVSLSIGHSEVSTAIATEEQSWTLNNLLPGLVVKAQVQKVTPLGLTLNFLSFFT
GLVDFMHLEPKKAGTYFSNQAVRACVLCVHPRTRAVRLSLRPVFLQPGRPLTQLSCQHLG
AVLDDVPVQGFFSKAGATFSLKDGSLAYARLSHLSDSKKTFNPEAFKPGNTHKCRIINYS
QMDELALLSLRTSIIEAQFLGYHDIKPGALVKGTVLTIKPYGMLVKVSEQIRGLVPPMHL
ADIPMKNPEKKYHIGDEVTCRVLLCDPEAKKLMMTLKKTLVESKLPAITCYDDTKPGLQT
HGFILRVKDYGCIVKFYNDVQGLVPKHELSAEYVPDPERVFYTGQVVKVAVLNCEPSKER
MLLSFRLLTDPKKEHVGQSQKKRKAVNVGQLVDVKVLEKTKDGLEVTVLPHNIPAFLPTS
HLSDHVANGPLLHHWLQAGDTLHRVLCLSQSEGHVLLCRKPALVSTVEGGQDPKTFSEIH
PGMLLIGFVKSIKDYGVFVQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVVAKVTNVD
EEKQRMLLSLRLSDCTLGDLATTSLLLLSQCLEERQGVRSLMSNRDSVLIQTLAEMTPGM
VLDLEVQEVLEDGSVVFSEGPVPGLVLRASKYHQAGQEVESGQKKKVVILNVDMLKLEVH
VSLCHDLVNRKAKKLKKGSEHQAIVQHLEESFAVASLVETGHLAAFSLTSHLNDTFRFDS
EKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRQTRKDSETVDEDDEGDPSMVVGT
KKKHTLSIGDMVTGTVKSIKPTHVVVTLENGIIGCIHASHILDDVPEGTSPTARLKVGKK
VTARVIGGRDVKTSKFLPISHPRFIRTIPELSVRPSVLEKDGHAALNTHSVSPLEKIKQF
QAGQTVTCFLKKYNVIKKWLEVEIAPDIRGRIPMLLISLSFKVLKHPDKKFQIGQALKAT
VVGPDSSKAFLCLSLIGPHKLEKGEVAMGRVVKVTPNKELTVSFPFGRIGRVSIFHVSDS
YSEAPLEDFTPEKIVRCYVLSTADEVLTLSLRSSRTNPETKSKVPDPEINSIQDVQEGQL
LRGYVKSVQPHGVLLGLGPSVVGLAQYPRVSQHSPSEKALYERYLPEGKLLTAKVLSVNH
QKNLVELSFLPSDTGKPDVFPASPGLSPLKQGEKQVEVEERDHKGKEEKEKKKKNQKRKE
KRNQKGQEEAQLPSKEKKEPQKPHAEKQGKRPHRESASEQERANKKQKKAAPAEEDDSGV
EVYYREGEEEMEEISVLPKGKQTRPAEVPRLQLSSGFVWDVGLESLTPALPPRRESSDSE
EDEKPQQTTQKKKSKKERELEKQKAEKELSRMEEALMDPGRQPESADDFDRLVLSSPNSS
ILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTK
VFERAVQYNEPLKVFLQLADIYTKSEKFQEAGELYNRMLKRFRQEKAVWVKYGAFLLRRG
QAGASHRVMQRALECLPQKEHVDVISKFAQLEFQLGDAERAKAIFENTLSTYPKRTDVWS
VYIDMTIKHGSQKEVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKAL
DYVEAKSSVLED
NT seq
5799 nt
NT seq
+upstream
nt +downstream
nt
atgcaatctcagggcctccgggagctcttgggcgttgagcccgcccacacttccgggaga
gctgccagtgcttgggctgtaccggggctcctccgcacgtgtgactacagtggcgcggcc
tcggaagttgaggctggccggcggcgcgaggctggaaacccaaccatagcaaccatggaa
gaaagcttcccccgtgggggtacaaggaagacccacaaatcagagatagcgccccagcag
tcagttgaacaagacaacttgtttgatgtttctactgaagaggaatccatcaaaaggaaa
aaaagccagaaagggccagcaaaaacaaaaaagttgaaaattgaaaagagagaaagcagc
aagtctatagaagagaagtttgaaatccttagtattgagtccctgtatgaggggatgcgg
attttggggtgtgtgaaagaggtaaatgaactggaactggtgattagtctccccaatggc
ctccaggggttcgtgcaagtaactgaaatcagtgatgcttacacaaaaaaactgaatgag
caggtggagcaagaggaacctctaaaggacctggccagtttgcctgaactgttctctcct
gggatgctagtgagatgtgtggtgagcagtctgggcatcacagagaaaggcaaaaaaagt
gtcaagctatctctcaacccccaaaatgtcaacaaagtgctgagtgcggaggccctgaag
cctggcatgttgctcacaggcactgtatctagtctagaagaccatggctacctagtggac
attggtgttggtggggccagagctttcctgccactgcaaaaagcccaggagtatatcaga
cagaagaacaaaggtgctaagctgaaggtgggtcagtacctgcactgcgtcattaaagag
gtgaaaggcaacggaggagttgttagtctgtctattggtcattcagaagtttctactgcc
attgctactgaggagcaaagctggacccttaataacttgctacctggattggtggtcaaa
gcccaggtacagaaggtgactccacttggtcttacactcaacttcctctcattcttcact
ggcctggttgattttatgcacttagagcccaagaaagctggaacatacttctcaaatcaa
gcagtgagagcctgcgtcctctgtgtccatcctcgcaccagagctgtgcggctgagcctg
cgccccgtcttcctgcagcctgggcgcccactcacccagctgtcttgtcagcacctcgga
gctgtcctggatgatgttcctgtccagggctttttcagcaaggccggggccactttcagc
ctgaaggatgggtctctggcctatgctcggctcagccatctctctgattctaagaaaacc
ttcaatcctgaagccttcaagccaggaaatactcacaagtgtcgaatcatcaactacagc
caaatggatgaactggctttgctctctctgaggacgtctattattgaagctcagttcctt
ggatatcatgacatcaaacctggggcattggtaaagggcacagtgctgaccataaagcca
tatgggatgttggtgaaggtgagtgagcagatcaggggcttggtacctcccatgcacctg
gccgacatcccgatgaagaatccagagaagaagtaccacatcggggacgaagtcacatgc
cgggttttgctttgtgaccctgaagccaagaagctgatgatgaccctgaagaaaaccctg
gttgagtccaaactacctgccattacctgttatgacgacactaagcctggtctgcagaca
catggcttcatcctcagggtcaaggactacggctgcattgtgaagttctacaatgatgtg
cagggactggtacccaagcatgagctcagtgctgagtatgtccctgacccagagagggtc
ttttacactggccaggtggtgaaggttgcggtgctgaactgtgagccatccaaagagagg
atgctcttgtccttcaggctgttgactgacccaaagaaagagcatgtaggacaaagtcag
aagaaaagaaaagccgttaacgttgggcagttggtggatgtgaaggttttagagaagact
aaggacgggctggaggtgactgtcctgccccacaacatccctgctttccttcccacgtcg
catctgtcagatcacgtcgccaacggccccctgttacatcactggctgcaggctggtgac
acccttcacagagtcctgtgtctgagtcagagtgagggacatgttctcctttgtaggaag
ccagctttggtctccacagtagagggtggccaggatcccaagaccttctcagaaatccat
cctggaatgctgctcattggctttgtgaagagcatcaaggactacggcgtgttcgtccag
ttcccctcaggccttagcggactggcccccaaagctatcatgagtgacaaatttgtgacc
tccacaagtgaccacttcgtcgaggggcagacggtggttgcaaaggtgaccaacgtggac
gaggagaagcagcggatgctcttgtcgctgcggctgtcggactgcactctgggagacctg
gctaccaccagcctcctcctcctgagccagtgcctggaggaacggcagggcgtgcgcagc
ctcatgagcaaccgagactctgtgttgatccagacgctggctgagatgaccccagggatg
gtccttgacctagaggtgcaagaggtgttggaagatggctctgtggtgttcagtgagggc
ccagtgcctggtctggtcctgagagccagcaaataccatcaggcagggcaggaggtggaa
tctgggcagaaaaagaaggttgtgatcttgaatgttgacatgttgaagttggaagtacat
gtttccctttgccacgatttggtgaataggaaagctaaaaagctgaagaaaggcagtgaa
caccaggcgattgtgcagcacttggaggagtcctttgccgttgcttccttggtcgagact
ggccacctggcagctttctctctgacctctcatctcaatgacacattccgctttgactcg
gagaagttgcaagtgggacagggtgtctccctaactctcaagaccacggaacccggagtg
actggccttctcttggctgttgagggaccagctgctaagaggacaatgagacagacccgg
aaggactctgagacggtcgacgaggatgatgaaggggatccgtccatggttgtagggact
aaaaagaagcacaccctctccattggggacatggtcacagggactgtcaagtccattaag
cccacccatgtggttgtgaccctggaaaatggcatcattggctgtatccatgcctcccac
attctagatgacgttccagagggcacatctcctactgccaggctgaaggttgggaagaag
gtcactgcccgtgtgattggagggcgagacgtgaagacgtccaagtttctcccaataagt
catcccaggtttatccgaaccatcccggagctgagtgtgcggccaagtgtgctggagaag
gatggccatgctgctctcaacactcactctgttagccctttggagaagattaaacagttc
caggctggtcagaccgtgacttgcttcttgaagaagtacaacgtgattaagaaatggctc
gaggtggagattgctccagacatccggggaagaattcccatgttgcttatttctcttagc
tttaaggttctgaaacatccagataagaagttccaaattggccaggccctgaaggccacc
gtggttggtccagattcctcgaaggccttcttgtgtctctcactcataggtcctcacaag
cttgaaaagggggaagtggccatgggccgagtggtgaaggtgacccccaacaaggagctg
actgtctccttccccttcgggaggattggaagagtcagcatatttcacgtgagcgactcc
tactcagaggcgcccctggaagacttcacccccgagaagatcgtcaggtgttatgtcctg
tccactgcagacgaggtattgactttgtcgctgcgatcgtccaggacaaacccagagacg
aaaagcaaagtaccggatcccgagattaactccatccaggacgttcaggaggggcagctc
ctgaggggctatgtgaagtccgtgcagccacacggcgtgctccttggccttggcccctca
gtggtgggattggcccagtatccacgtgtctcccagcacagcccgtccgagaaagccctt
tatgagagatacctccccgaagggaagctgctcacagccaaggtcctaagcgtgaaccac
cagaagaacctggttgaactgtcgttcctccccagcgacactgggaagcccgacgtgttt
cctgcctccccaggactgtcacctctaaagcaaggggagaagcaagtagaggtagaggag
agagaccacaaaggaaaagaagagaaggagaagaagaagaagaaccagaaaaggaaggag
aagcggaaccagaaggggcaggaggaggcccagctgcctagcaaagagaagaaagagccc
cagaaaccacacgcagagaagcagggcaagcggcctcatcgggagtcggcaagtgagcag
gaaagggcaaacaagaagcagaagaaggctgctccggccgaggaggacgacagtggagtt
gaagtgtattatcgggaaggagaagaagagatggaagagatcagtgtgctgcccaagggg
aagcagaccaggccagcagaagtgccccggctgcagctgtcttccggcttcgtttgggac
gtggggctagaatctctgaccccggccttgccacctcgaagagagagctcagacagcgag
gaagacgagaagccacagcaaaccacgcagaagaagaaaagcaagaaggaaagggagctg
gagaagcagaaggcagagaaagagctgtcccgcatggaggaggcgctgatggaccctggg
cgacagccagagtcagcagatgattttgaccgactggtgctgagctcccccaacagctcc
atcctgtggctgcagtacatggccttccacctgcaggccacagagatcgagaaggcccgg
gctgtggccgagagggctctcaagaccatctccttcagagaggagcaggagaagctgaac
gtgtgggtggcactgctgaacctcgagaacatgtacgggtctcaggagtcactgaccaag
gtcttcgagcgggctgtgcaatacaatgagcctctcaaggtctttctccagctggctgac
atctacaccaagtcagagaagttccaggaagctggtgaactctacaaccgcatgctgaag
cgtttccggcaggagaaagctgtctgggtcaaatatggggccttccttctgcggaggggc
caggctggggccagtcaccgtgtgatgcagcgagccctcgagtgcctgcctcaaaaagag
cacgtggatgtgatctccaagttcgcccagctggagttccagctgggggatgcagagcgg
gccaaggctatttttgagaacacactgagcacctacccaaagcgcacggatgtctggtcg
gtctacatcgacatgaccatcaagcatggcagccagaaggaagtccgggacatcttcgag
cgcgtcattcacctgagtctggcccccaagcgaatgaaattcttcttcaagcgctacctg
gactatgagaagcagcacggcaccgagaaggacgtgcaggcagtgaaggcgaaggccctg
gactatgtggaggctaagagctccgtgttggaggactag
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integrated database retrieval system
