Myotis lucifugus (little brown bat): 102429358
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Entry
102429358 CDS
T07795
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
mlf
Myotis lucifugus (little brown bat)
Pathway
mlf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102429358 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlf03041
]
102429358 (CDC40)
Spliceosome [BR:
mlf03041
]
Complex C
Other components
Step II factors
102429358 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
EIF3I
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
WD_LRWD1
WDR54
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
102429358
NCBI-ProteinID:
XP_006104101
Ensembl:
ENSMLUG00000001809
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MLPAPPPRSKLHFPLCLWFPVALHAGSAGLRPAKYIGIRSLKSKRTWEPPLLPPGPGLRS
STAVMSAAIAALAASYGSGSGSESDSDSEGGRCPLPAADSLMHLTKSPSAKPSLAVAVDA
APEVAVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMAAPRNMLSGYAE
PAHINDFMFEQQRRTFATYGYALDPSLDNQVTTKYIGSVEEAEKNQGLTVFETGQKKIEK
RKKFKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKLEEEKPGEE
KTILHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHTKGVSAVRLF
PLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLK
LWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRH
LGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLA
CQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDW
KTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgctgccggccccgccccctcgatctaaactacatttcccattgtgcctctggtttcct
gtcgcgctgcacgccgggagtgcaggactccgaccggcaaagtatatcggaattcgtagt
cttaagtcaaaaaggacctgggagccgccgcttcttccgccggggcctggtctccgcagc
tctaccgccgtcatgtcggctgcgattgcagctctggctgcttcctacggttcgggttca
gggtccgaatcggactcggacagtgagggcggacggtgtccactgccagcggcggactcc
ctcatgcacttgaccaagtcgccttccgccaagccctctctggcggtggcggtggacgcg
gctccggaggtggcagttaaggaagatttggagactggagttcaccttgaccctgctgtc
aaggaagttcaatataatcctacctatgagaccatgtttgctcctgagtttggaccagaa
aatccctttaggacccagcaaatggctgcccccagaaatatgctttctgggtatgctgaa
ccagctcatatcaatgattttatgtttgaacagcaaagaagaacttttgccacatatggt
tatgcgttggacccttcattagataatcaagtaactactaaatatattggttctgtagaa
gaagctgaaaaaaatcaaggtttaactgtgtttgaaactggtcagaagaaaatagaaaag
aggaaaaagttcaaagaaaatgatgcatctaacattgatggtttcctgggaccatgggca
aaatatgtggatgaaaaagatgtagccaaaccttcggaagaagaacaaaaagaattggat
gaaatcacagcaaagaggcagaaaaaaggcaaactggaagaagagaagcctggggaggaa
aagaccatcttacacgttaaagaaatgtatgactatcaaggcaggtcctatcttcacata
cctcaggatgttggtgttaatctgcggtcatctgtgccacctgagaagtgttatctcccc
aaaaaacaaattcatgtgtggtccggacacacaaagggtgtcagtgctgtcagattgttt
cctctctcgggccatttattgctgtcttgttccatggactgtaaaattaagctatgggag
gtttatggagacaggcgctgtctgcgaacatttattggtcacagtaaagctgttagggac
atctgctttaatactgcaggaacacagttcctcagtgcagcttacgacaggtatcttaag
ctctgggacactgagacaggacagtgtatatcaagatttactaaccgaaaagtaccctat
tgtgtcaagtttaatcctgatgaagataaacaaaatctctttgtggctgggatgtctgat
aaaaagattgtgcaatgggacattcgaagtggagaaattgtgcaggaatatgatcggcat
ttgggagctgtcaacaccattgtttttgttgatgagaataggagatttgtgagcacatct
gatgataagagccttagagtttgggaatgggatatccctgtggatttcaagtatatagca
gaacccagtatgcactcaatgcctgcagtgactttgtctccaaatgggaaatggctagca
tgccagtcaatggacaaccaaatcttaatttttggagcacagaacagatttagattaaat
aagaagaaaatttttaagggccatatggtagcaggctacgcttgtcaggtggacttttca
cctgacatgagctatgtgatttcaggagatggaaatggaaagttgaacatctgggactgg
aagaccacaaaactctacagtcggtttaaagctcacgataaagtgtgtattggtgcagtg
tggcatcctcacgaaacatctaaagtcatcacctgtggctgggatggtctcattaagttg
tgggattga
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