Myotis lucifugus (little brown bat): 102431088
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Entry
102431088 CDS
T07795
Symbol
PCF11
Name
(RefSeq) pre-mRNA cleavage complex 2 protein Pcf11 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
mlf
Myotis lucifugus (little brown bat)
Pathway
mlf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102431088 (PCF11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlf03021
]
102431088 (PCF11)
03019 Messenger RNA biogenesis [BR:
mlf03019
]
102431088 (PCF11)
Transcription machinery [BR:
mlf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102431088 (PCF11)
Messenger RNA biogenesis [BR:
mlf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
102431088 (PCF11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PCF11_RFEG_rpt
PCF11_charged
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
SHOCT
Motif
Other DBs
NCBI-GeneID:
102431088
NCBI-ProteinID:
XP_006098527
Ensembl:
ENSMLUG00000013052
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MSEPTPAEAGTAGAREDACRDYQSSLEDLTFNSKPHINMLTILAEENLPFAKEIVSLIEA
QTAKAPSSEKLPVMYLMDSIVKNVGREYLTAFTKNLVATFICVFEKVDENTRKSLFKLRS
TWDEIFPLKKLYALDVRVNSLDPAWPIKPLPPNVNTSSIHVNPKFLNKSPEEPSTPGTVV
TSPSISTPPIVPDIQKNLTQEQLIRQQLLAKQKQLLELQQKKLELELEQAKAQLAVSLSV
QQETSNLGPGSAPSKLHVSQIPPMAVKTPHQIPLQPEKSRAGPSLQIQDLKGTNRDPRLN
RMSQHSSHGKDQSHRKEFLMNTLNQSDIKTSKTIPSEKLNSSKQEKSKSGEKITKKELDQ
LDSKSKSKSKSPSPLKNKFSHTKDLKNQESECPRVSDMSKRDPRLKKHLQDKADSKDDDI
KEKRKTSEKKDKDEHMKSSEHRLVGSRNKIVNGIVQKQDVITEDSEKQGTKPGRSSTRKR
SRSRSPKSRSPIIHSPKRRDRRSPKRRQRSMSPTSTAKAGKIRQSGCKQSHMEDFMPPSR
EERNAKRSTKQDVRDPRRIKKTEEERPQETTSQHSTKSGTEPKENVENWSSSKSNKRWKS
GWEENKSLQQGDDHSKSPHLRHRESWSSTKGILSPRAPKQQHRLSVDANLQIPKELTLAS
KRELLQKTSERLASGEITQDEFLVVVHQIRQLFQYQEGKHRCNVRDSPSEENKGGLKKKP
LLSDAELTYYEHKAKLKRTQVQHSFPRLDLLDPDIFDYPLTDALLSGIECEPSKSKHASR
NSGAQFDRKEQFSERARRLSPISGSRSYAENLSPHEGRRRHDEQVSAKGVREEQRSPFND
RFPLKRPRYEDADKPFVDSPASRFAGLDTNQRLTALAEDRPLFDGPSRPSVTRDGPTKMI
FEGPNKLSPRIDGPPAPGSLRFDGSPGQMGGGGPLRFEGPQGQLGGACPLRFEGPPGPVG
TPLRFEGPIGQAGGGGFRFEGSPGLRFEGSAGGLRFEGPGGQPVGGLRFEGHRGQPVGGL
RFEGPHGQPVGGLRFDNPRDQPVSGHRFAGGHGPSGAAIRFDGPPGQPAGGIRFEGPLLK
QGVGMRFEGPHGQSVIGLWFEGQHNQLGGNLRFEGPHGQPGVGIRFEGPLVQQGGGMRFE
GPVPGSGLRIEGPLGQGGLRFEGCHALRFDGQPGQPSLLPRFDGFYGQPGPRFERTGQPG
PQRFDGPPGQQVQPRFDGVPQRFDGPQHQQASRFDIPLGLQGARFDNHPSQRLESVSFSQ
TGPYNEPPGNAFNAPSQGLQFQRHEQIFDSPQGPNFNGPHGPGNQSFSNPLSRASGHYFD
EKNLQSSQFGNFGNLPAPITVGNIQASQQVLTGVAQPVPFGQGQQFLPVHPQNPGAFVQN
PSGALPKAYPDNHLSQVDVNELFSKLLKTGILKLSQPDSATTQVNEVAAQPPTEEEEDQN
EDQDVPDLTNFTIEELKQRYDSVINRLYTGIQCYSCGMRFTTSQTDVYADHLDWHYRQNR
TEKDVSRKVTHRRWYYSLTDWIEFEEIADLEERAKSQFFEKVHEEVVLKTQEAAKEKEFQ
SVPAGPAGAVESCEICQEQFEQYWDEEEEEWHLKNAIRVDGKIYHPSCYEDYQNTSSFDC
TPSPSKTPVENPLNIMLNIVKNELQEPCESPKVKEEQIDTPPACTEESIATPTEIKTEND
TVESV
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccgacgccggccgaggccggtaccgcgggggcccgggaggacgcctgtcgg
gattatcagtcatctctcgaagacctgaccttcaatagcaaaccgcacatcaatatgctg
accattctagccgaggagaacctgcccttcgccaaggagatcgtctctctcatcgaggcc
caaaccgccaaggctccttcctcagagaagcttcctgttatgtaccttatggattctatc
gtgaaaaacgttggacgagagtatctcactgcctttactaaaaatctagttgcaacattt
atttgtgtgtttgaaaaggtggatgaaaatactagaaaaagtttatttaaattacgttcc
acatgggatgagatattcccattgaagaaactttatgccctggatgtcagagtcaattca
ttagatcctgcttggcctattaaacctctaccccccaatgtgaatacatctagcatccat
gtgaatcctaaatttttaaataaatcgcctgaagagccttcaacacctggcacagtggtc
acttcccctagcatctccactcctccaattgttcctgatatacaaaagaatcttacccaa
gaacaactaataaggcagcagttacttgcaaaacaaaaacagttattagaacttcagcag
aaaaagctggagcttgaactagagcaagctaaagcacaactggcagtttctcttagtgtt
cagcaggagacatccaacttaggtcctggatctgcaccatccaaattacatgtttcacaa
attccccctatggcagttaaaactccccatcagattcctttgcaacctgaaaaaagccgt
gcaggtccatccttacaaattcaggacttgaaaggaacaaaccgggatccccgtcttaat
aggatgagtcagcattcttctcatggaaaagatcaaagtcacagaaaagaattcctaatg
aatacattaaaccaatctgatattaagacaagtaaaactataccttctgaaaaactaaat
tcatctaaacaagaaaaaagtaaatcaggtgaaaaaataaccaagaaagaacttgaccag
ttagattctaaatctaaatctaaatctaaatcaccatcacctttgaaaaacaaattctct
cacaccaaagacttgaaaaatcaagaatctgaatgcccaagggtgtctgacatgagtaag
agagatccaagattaaaaaaacatcttcaagataaggctgatagcaaagatgatgatata
aaagagaagagaaaaacttcagaaaaaaaagataaagatgagcatatgaaatcatctgaa
catagactggttggaagtcgaaataaaatcgttaatggcattgtacaaaaacaagatgta
ataacggaagactcagaaaaacagggaacaaaaccagggagatcaagtactagaaagcga
tcaagatcgagatcacccaagtctcggtcaccaattatacattctcctaagagaagagat
aggcggtcacccaaacgaaggcaaaggagtatgtctccaacctcgacagccaaagctgga
aagattcgccaatctggatgtaagcagtcacatatggaagactttatgccaccttccagg
gaagaaagaaatgctaagagaagtactaaacaggatgttcgagatccaaggcgaataaaa
aagactgaagaggaacgaccgcaagaaactacaagtcagcattctacaaagtcaggcact
gaaccgaaggagaatgtagaaaattggtcaagttccaagtctaacaaaagatggaaatct
ggttgggaagaaaataaaagcttacaacaaggtgacgaccatagtaaatctcctcatcta
aggcatagggaaagctggtcaagcactaaaggaattttgtcacctcgagccccaaagcaa
cagcatcgattaagtgtagatgccaatcttcagattcctaaagagttaactcttgcaagc
aaaagagaattacttcaaaagacgagtgaacgtttagcatctggtgaaattacacaggat
gagttccttgttgttgtgcatcaaattcgacagctatttcagtatcaagaaggtaaacat
agatgcaatgtacgcgatagtccttcagaagaaaataaaggtggattaaaaaagaaacct
ctcttatctgatgctgaattaacctactatgaacataaagcaaaactgaaaaggacacag
gttcagcattcatttccaagacttgatctcttagatcctgatatttttgactaccctttg
actgatgccttgttgtctggaatagaatgtgagccatccaaaagtaaacatgcaagtagg
aatagtggagcacagtttgacagaaaagaacaatttagtgaaagagcaagacgtctttct
cctatatctgggagtcgttcttatgctgagaatctttcaccccatgagggccggagaaga
catgacgagcaagtctctgctaaaggtgtgcgagaagagcagaggtcaccattcaatgat
cgttttccacttaagcgacctagatatgaagatgcagataaaccatttgtagatagccca
gcatcacgattcgccggcctcgatacaaatcagcgacttacagcgttagctgaagacaga
ccattatttgatggacctagtaggccatcagtaacaagagatggcccaaccaagatgatt
tttgaaggacctaataaattaagccctcgaattgatggacctcctgcaccaggttctctt
cgatttgatgggtcacctggacaaatggggggaggtggtcctttgagatttgaaggacca
caaggtcagctaggaggcgcatgtcctttgagatttgaaggtcctccaggaccagtaggg
acacctttgcggtttgaagggccaattggtcaagcaggcggaggtggttttcggtttgaa
ggttcccctggtctgaggtttgagggatctgcaggtggcctacgatttgaaggaccaggg
ggccagcctgtgggtgggctcaggtttgagggacatcggggtcaacctgtgggaggtctg
aggtttgagggacctcatggtcagcctgtgggtggacttagatttgataatccccgagat
cagcctgtaagtggacatagatttgcggggggtcatggtccatcaggagctgcaattagg
tttgatggacctcctggtcagccagcaggtgggatcagatttgagggccctttgctaaag
cagggagttggaatgaggtttgagggcccccatggtcagtcagtaattggtctgtggttt
gaaggacaacataatcaacttggtggaaaccttaggtttgagggtccacatggtcaacca
ggggttgggatcaggtttgagggacccttagtccaacaaggaggtggaatgaggtttgag
ggtcctgtaccaggaagtggactgagaattgaagggcctctgggtcaaggtggtctaaga
tttgaaggttgtcatgctttaaggtttgatgggcagccaggtcagccatcactcttacca
agatttgatggattctatggtcaaccaggtcctagatttgaaagaactggtcaaccaggc
ccacagagatttgatggaccacctggacagcaggttcaaccaagatttgatggtgttcct
caaagatttgatggtccacaacaccagcaagcatcaaggtttgatattccccttggtctt
caaggcgcacgatttgacaatcatccttcgcaaaggcttgaatccgtttctttcagtcag
actggtccatataatgagccgcctggcaatgcttttaatgccccatcccaaggactgcaa
ttccaaagacacgaacaaatatttgattcacctcaaggaccaaattttaatggaccacat
ggccctgggaaccagagtttctcaaatccccttagcagagcttctggacactattttgat
gaaaagaatcttcaaagttctcaatttggaaactttggcaatttacctgctccaataaca
gtaggaaacattcaggcatctcaacaggttctgactggtgttgctcaaccagtaccattt
ggccagggacaacaatttttaccagttcatccacaaaatcctggagcatttgttcagaat
ccttcaggagcccttcctaaggcatatcctgataatcacctcagtcaggtggatgtaaat
gaattattttcaaaactgctaaaaacaggaattctcaaattgtcccagcctgattcagct
acaacacaagtaaatgaagttgctgctcagcctcccactgaagaggaggaagatcaaaat
gaagatcaagatgttccagatcttaccaattttacaattgaagagttaaaacagcgttat
gatagtgttataaatcgactatacactggtattcagtgttactcttgtggaatgaggttt
acaacatcacagacagatgtttatgcagatcacttggactggcattatcggcaaaataga
actgaaaaagacgttagcagaaaagtcactcatagacgttggtactacagtttaacagac
tggatagaatttgaggaaatagctgatttggaagaacgtgcaaagagccagttttttgaa
aaggtgcatgaagaagttgtgctcaaaactcaggaagctgctaaagaaaaggagttccaa
agtgtaccggcagggccagctggagcagtggagagttgtgaaatctgtcaagaacaattt
gaacaatactgggatgaagaagaggaggagtggcatttaaagaatgccattagagtggat
ggaaagatttatcatccatcatgttatgaagattatcaaaatacatcttcatttgattgt
acaccatctcccagcaagacaccagttgaaaaccctttgaacattatgttgaacattgtc
aaaaatgaattgcaggaaccctgtgaaagtcccaaagttaaggaagaacaaattgatacc
ccaccagcttgtacagaggagagcatagcaacacccactgaaattaaaactgaaaatgat
acagttgagtcagtttaa
DBGET
integrated database retrieval system
