KEGG   Myotis lucifugus (little brown bat): 102432837
Entry
102432837         CDS       T07795                                 
Symbol
SYMPK
Name
(RefSeq) LOW QUALITY PROTEIN: symplekin
  KO
K06100  symplekin
Organism
mlf  Myotis lucifugus (little brown bat)
Pathway
mlf03015  mRNA surveillance pathway
mlf04530  Tight junction
Brite
KEGG Orthology (KO) [BR:mlf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102432837 (SYMPK)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    102432837 (SYMPK)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mlf03021]
    102432837 (SYMPK)
   03019 Messenger RNA biogenesis [BR:mlf03019]
    102432837 (SYMPK)
Transcription machinery [BR:mlf03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     102432837 (SYMPK)
Messenger RNA biogenesis [BR:mlf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     102432837 (SYMPK)
    U7-dependent histone pre-mRNA processing factors
     102432837 (SYMPK)
SSDB
Motif
Pfam: Radial_spoke Symplekin_C SYMPK_PTA1_N CRM1_C
Other DBs
NCBI-GeneID: 102432837
NCBI-ProteinID: XP_023604615
LinkDB
Position
Unknown
AA seq 1544 aa
VLWEEGKAALEQLLKFMVHPAISSINLTTALGSLASIARQRPIFMSEVIQAYETLHANLP
PTLAKSQVSSVRKNLKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEITRNMPSSKDAR
KRPRDDSDSSLKKMKLEPNLGEDDEDKDLEPGPSGTSKVSAQISGQSDTDITAEFLQPLL
TPDNVANLVLISMVYLPEVMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGV
EQTKQCKEEPKEEKVVKPESVLIKRRLSAQGQAISVVGSLGSMATLEEEAPQAKRRPEPI
IPVTQPRLAGAGGRKKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQARI
KILASLVTQFDSGLKAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGTSGSLDKYEDCL
IRLLSGLQEKPDQKDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKR
PSRQFQYLHVLLDLSSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPP
SVLFGADKDTEVAAPWTDETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRV
IEQPVRPTPSPSPGVCAIAEHCPQALRSIVTRCRLLILPAVPPSPELVKRVRDLYHKRLP
DVRFLIPVLNGLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELL
IALHNIDSAKCDMKSIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSL
TMYPRLGGFVMNILSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFD
KCPELREPLLAHVRSFTPHQQAHIPNSIMAILEASGKQEPEAKETPAGPLEEDDLEPLAP
APAPAPAPRPPQDLMGLRLAQEKALKRQLEEEQKLKPGGVGAPSSSSARPAPPQPDEAVD
FREEGPEGETPAIFISVDEDPGLPEAALLDSSLEGPPPKVGLAPRSGEEGAYRRVRGRAT
GRPVCKPPSAAMGDPPPDPEQPPPGSSQGPEPRRSGEAPFVQFSLPPEGPRAELEAPRGS
QEGPGADEEPPSDSQRLAYLDEDEDGLQAELLEQLQQGRGSLLQQLEAAFQDPPPDAAGL
FSYQREDQPFGEDALHGPYASDDPSLQFSPSELGFLPFDMEVSEPEPRELAVQNAKAYLL
QTSISCDLSLYEHLVNMLTKILNQRPEDPLAILESLNRTTQLEWFHPKLDSLRDDPEMQP
TYEMAERQKSLFVRGGGSAEGEQEMEEEVVDTAVPNVMESAFYFEQGGVGLSSDESFRLF
LALKQLVEQQPIHTCRFWGKILGLKRSYLVAEVEFREGEEEVEEEEMEELTEGGEIMDAH
GEEEGEEDEEKAADVIPKPLWKPPPVIPKEESRSGTNKYLYFVCNEPGRPWTKLPHVTPI
QIVQARKIKKFFTGYLDAXVISYPPFPGNEANYLRAQIARISAATHIXPLGFYQFNEEEG
DEEEEGGAGRDSFEENPDFEGVPVFELVDSMANWVHHMQHILPQ
NT seq 4634 nt   +upstreamnt  +downstreamnt
acgtgctgtgggaggagggcaaggcagccttggagcagctcctcaagttcatggtgcacc
ccgccatctcctccatcaacctgaccacagcgctgggctccctcgccagcatcgcccgcc
agaggcccatattcatgtctgaggtgattcaggcctatgaaaccctgcatgccaacctgc
cccccacgctggccaagtctcaggtgagcagcgttcgcaagaacctcaagttgcacctgt
tgagtgtgctgaagcacccagcctccttagagttccaggcccagatcaccaccctgctgg
tggacctgggcacgccccaggccgagatcacccgcaacatgcccagcagcaaggatgccc
gaaagcggcctcgagatgactcggattcctcgctcaagaagatgaagctggagcccaacc
tgggggaggacgacgaggacaaggatttggaaccaggcccatcggggacctcgaaggtct
cggcccagatctcgggccagtcagacacagacatcacagccgaattcctgcagcctctgc
tgacacccgacaacgtggccaacctggtcctcatcagcatggtgtacctgcctgaggtca
tgcctgcctccttccaagccatctacaccccagtggagtcggcaggcaccgaagcccaga
tcaagcacctggctcggctcatggccacacagatgacggccgcaggactggggcccggtg
tggagcagaccaagcagtgcaaggaggagcccaaggaggagaaggtggtgaagcctgaga
gtgtcctgatcaagcgacgcctgtcagcccagggccaggccatctcggtggtgggctccc
tgggctccatggccaccctggaggaggaggcgccccaggccaagagaaggccagagccca
tcatccctgtcacgcagccccggctggcgggtgccgggggccgcaagaagatcttccgtc
tgagcgatgtcctgaagcccctgaccgacgcccaggtcgaggccatgaagctgggcgctg
tgaagcggatcctgcgggccgagaaggctgtggcctgcagcggggcggcccaggcgcgca
taaagatcctggccagcctcgtgacgcagttcgactcgggcctgaaggctgaggtcctgt
ccttcattctggaggacgtgcgggcccgcctggacctggccttcgcctggctctaccagg
agtacaacgcctacctcgcagccggtacctcgggctccctggacaagtacgaggactgcc
tcatccgcctgctctccggcctgcaggagaagccagaccagaaggatgggatcttcacca
aggttgtgctggaggcgcccctgatcacggagagtgccctggaggtgattcgcaagtact
gcgaggatgagagtcgcacctacctgggcatgtccaccctccgagacctgatcttcaagc
gcccgtcccgccagttccagtacctgcacgtcctgctggacctcagctcccatgagaagg
acaaggtgcgctcccaggccctgctgttcatcaagcgcatgtacgagaaggagcagctgc
gagagtatgtggagaagtttgccctcaactacctgcagctcctggtccaccccaacccgc
catccgtgctgtttggagccgacaaggacacagaggtggcagcgccctggaccgacgaga
cagtgaagcagtgtctgtacctctacctggccctcctacctcagaaccacaagctgatcc
acgaactggcagctgtgtacactgaggccatcgccgacatcaagcggacggtgctgaggg
tcatcgagcagccggtgaggcccacccccagcccctcccctggtgtgtgcgcgatcgcgg
agcactgtccccaagctttaagatctattgtcaccaggtgccgcctcctcattctgcctg
cagtcccgccctccccggagctggtgaagcgcgtccgggatctctaccacaagcggctgc
ccgatgtccgcttcctcatccctgtgctcaacgggctggagaagaaagaagtgatccagg
ccctgccgaagctcatcaaactcaaccccatcgtggtgaaggaggtcttcaaccgcctgc
tgggcacccagcacggtgaagggaactcggccttgtccccgctgaaccctggagagctgc
tgatcgcattgcataacatcgactcggcaaagtgcgacatgaagtccatcatcaaagcca
ccaacctgtgctttgcggagcggaacgtgtacacatcggaggtgctggccgtggtgatgc
agcagctgatggagcagagtcccctgcccatgctgctcatgaggaccgtcatccagtccc
tgaccatgtacccccgcctggggggcttcgtcatgaacatcctgtcccgcctcatcatga
agcaggtgtggaagtaccccaaagtgtgggagggcttcatcaaatgctgtcaacgcacca
agccccagagcttccaggtcatcctgcagctgccaccccagcagctgggcgccgtgtttg
acaagtgcccagagctccgggagcccctgctggcccatgtccgctccttcaccccccatc
agcaagcacacatccccaactccatcatggccatcctggaggccagtggcaagcaggagc
cggaggccaaggagactcctgcagggcctctggaggaggatgacctggagcccctggcgc
cggcccccgccccggccccggcccccagacccccccaggacctcatgggcctgcggctgg
cccaggagaaggccttaaagcggcagctggaggaggaacagaagctgaagcctgggggag
tgggagccccctcttcctcctcggccaggccggcccccccgcagccggacgaagccgtgg
atttccgggaggaggggcccgagggggagaccccggccatcttcatcagcgtggacgagg
acccggggctgccggaggccgccttgctggactcgagcctcgaggggccgccgcctaagg
tagggctggctccgcggagcggcgaggaaggagcctaccggcgtgtgcgcgggcgggcaa
ccggccggcctgtctgcaagcctccctccgcggcgatgggggacccgccgcccgaccccg
agcagccgccgcccggcagctcccagggccccgagccgcggcgcagcggggaggccccct
tcgtccagttctcgctgcccccggaggggccgcgggccgagctcgaagccccgaggggca
gccaggaggggccgggggccgacgaggagccgccctcggactcccagcgcctggcctacc
tggacgaggacgaggacgggctgcaggccgagctcctggagcagctgcagcagggccggg
gcagcctcctccagcagctggaggcggccttccaggaccccccgcccgacgccgcgggcc
tgttcagctaccagcgagaggaccagccgttcggcgaggacgccctgcacgggccctacg
cgagcgatgacccttcgctccagttctcgccctccgagctgggcttcctgcccttcgaca
tggaggtgtcggagccggagccccgggagctggccgtgcagaacgccaaggcctacctgc
tgcagaccagcatcagctgcgacctgagcctgtatgagcacctggtgaacatgctgacca
aaatcctgaaccagcgcccagaggatcccttggccatcctggagtcgctgaaccgcacga
cacagttggagtggttccaccccaagctggactcgctgcgggatgaccccgagatgcagc
ccacctacgagatggccgagaggcagaagtcgctattcgtccggggcggcggcagtgcgg
agggcgagcaggagatggaggaggaggtggtagacacggccgtgcccaacgtcatggagt
cggccttctacttcgagcagggcggcgtgggcctgagttccgatgagagtttccgcctct
tcctggccctgaagcagctggtagagcagcagcccatccacacctgtcgcttctggggca
aaatcctggggctcaagcgcagctacctggtggccgaggtggagttccgggaaggcgagg
aggaggtggaggaggaggagatggaggagctgaccgagggtggcgagatcatggatgccc
acggcgaggaggagggcgaggaggacgaggagaaggccgccgacgtcatccccaagccgc
tctggaagcccccgcccgtcatccccaaggaggagagccgctcgggcaccaacaagtacc
tgtacttcgtgtgcaacgagcccggccggccgtggaccaagctgccgcacgtcacgccca
tccagatcgtgcaggcccgcaagatcaagaagttcttcaccggctacctggacgcancgg
tcatcagctacccgcccttcccgggcaacgaggccaactacctgcgggcccagatcgccc
gcatctcggcggccacgcacatcnagcccctgggcttctaccagttcaacgaggaggagg
gtgacgaggaggaggagggcggtgcagggcgagactccttcgaggagaacccggactttg
agggcgttcccgtgtttgagctggtggactccatggccaactgggtgcaccacatgcagc
acatccttccgcag

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