Myotis lucifugus (little brown bat): 102432837
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Entry
102432837 CDS
T07795
Symbol
SYMPK
Name
(RefSeq) LOW QUALITY PROTEIN: symplekin
KO
K06100
symplekin
Organism
mlf
Myotis lucifugus (little brown bat)
Pathway
mlf03015
mRNA surveillance pathway
mlf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102432837 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
102432837 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlf03021
]
102432837 (SYMPK)
03019 Messenger RNA biogenesis [BR:
mlf03019
]
102432837 (SYMPK)
Transcription machinery [BR:
mlf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102432837 (SYMPK)
Messenger RNA biogenesis [BR:
mlf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
102432837 (SYMPK)
U7-dependent histone pre-mRNA processing factors
102432837 (SYMPK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radial_spoke
Symplekin_C
SYMPK_PTA1_N
CRM1_C
Motif
Other DBs
NCBI-GeneID:
102432837
NCBI-ProteinID:
XP_023604615
LinkDB
All DBs
Position
Unknown
AA seq
1544 aa
AA seq
DB search
VLWEEGKAALEQLLKFMVHPAISSINLTTALGSLASIARQRPIFMSEVIQAYETLHANLP
PTLAKSQVSSVRKNLKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEITRNMPSSKDAR
KRPRDDSDSSLKKMKLEPNLGEDDEDKDLEPGPSGTSKVSAQISGQSDTDITAEFLQPLL
TPDNVANLVLISMVYLPEVMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGV
EQTKQCKEEPKEEKVVKPESVLIKRRLSAQGQAISVVGSLGSMATLEEEAPQAKRRPEPI
IPVTQPRLAGAGGRKKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQARI
KILASLVTQFDSGLKAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGTSGSLDKYEDCL
IRLLSGLQEKPDQKDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKR
PSRQFQYLHVLLDLSSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPP
SVLFGADKDTEVAAPWTDETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRV
IEQPVRPTPSPSPGVCAIAEHCPQALRSIVTRCRLLILPAVPPSPELVKRVRDLYHKRLP
DVRFLIPVLNGLEKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELL
IALHNIDSAKCDMKSIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSL
TMYPRLGGFVMNILSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFD
KCPELREPLLAHVRSFTPHQQAHIPNSIMAILEASGKQEPEAKETPAGPLEEDDLEPLAP
APAPAPAPRPPQDLMGLRLAQEKALKRQLEEEQKLKPGGVGAPSSSSARPAPPQPDEAVD
FREEGPEGETPAIFISVDEDPGLPEAALLDSSLEGPPPKVGLAPRSGEEGAYRRVRGRAT
GRPVCKPPSAAMGDPPPDPEQPPPGSSQGPEPRRSGEAPFVQFSLPPEGPRAELEAPRGS
QEGPGADEEPPSDSQRLAYLDEDEDGLQAELLEQLQQGRGSLLQQLEAAFQDPPPDAAGL
FSYQREDQPFGEDALHGPYASDDPSLQFSPSELGFLPFDMEVSEPEPRELAVQNAKAYLL
QTSISCDLSLYEHLVNMLTKILNQRPEDPLAILESLNRTTQLEWFHPKLDSLRDDPEMQP
TYEMAERQKSLFVRGGGSAEGEQEMEEEVVDTAVPNVMESAFYFEQGGVGLSSDESFRLF
LALKQLVEQQPIHTCRFWGKILGLKRSYLVAEVEFREGEEEVEEEEMEELTEGGEIMDAH
GEEEGEEDEEKAADVIPKPLWKPPPVIPKEESRSGTNKYLYFVCNEPGRPWTKLPHVTPI
QIVQARKIKKFFTGYLDAXVISYPPFPGNEANYLRAQIARISAATHIXPLGFYQFNEEEG
DEEEEGGAGRDSFEENPDFEGVPVFELVDSMANWVHHMQHILPQ
NT seq
4634 nt
NT seq
+upstream
nt +downstream
nt
acgtgctgtgggaggagggcaaggcagccttggagcagctcctcaagttcatggtgcacc
ccgccatctcctccatcaacctgaccacagcgctgggctccctcgccagcatcgcccgcc
agaggcccatattcatgtctgaggtgattcaggcctatgaaaccctgcatgccaacctgc
cccccacgctggccaagtctcaggtgagcagcgttcgcaagaacctcaagttgcacctgt
tgagtgtgctgaagcacccagcctccttagagttccaggcccagatcaccaccctgctgg
tggacctgggcacgccccaggccgagatcacccgcaacatgcccagcagcaaggatgccc
gaaagcggcctcgagatgactcggattcctcgctcaagaagatgaagctggagcccaacc
tgggggaggacgacgaggacaaggatttggaaccaggcccatcggggacctcgaaggtct
cggcccagatctcgggccagtcagacacagacatcacagccgaattcctgcagcctctgc
tgacacccgacaacgtggccaacctggtcctcatcagcatggtgtacctgcctgaggtca
tgcctgcctccttccaagccatctacaccccagtggagtcggcaggcaccgaagcccaga
tcaagcacctggctcggctcatggccacacagatgacggccgcaggactggggcccggtg
tggagcagaccaagcagtgcaaggaggagcccaaggaggagaaggtggtgaagcctgaga
gtgtcctgatcaagcgacgcctgtcagcccagggccaggccatctcggtggtgggctccc
tgggctccatggccaccctggaggaggaggcgccccaggccaagagaaggccagagccca
tcatccctgtcacgcagccccggctggcgggtgccgggggccgcaagaagatcttccgtc
tgagcgatgtcctgaagcccctgaccgacgcccaggtcgaggccatgaagctgggcgctg
tgaagcggatcctgcgggccgagaaggctgtggcctgcagcggggcggcccaggcgcgca
taaagatcctggccagcctcgtgacgcagttcgactcgggcctgaaggctgaggtcctgt
ccttcattctggaggacgtgcgggcccgcctggacctggccttcgcctggctctaccagg
agtacaacgcctacctcgcagccggtacctcgggctccctggacaagtacgaggactgcc
tcatccgcctgctctccggcctgcaggagaagccagaccagaaggatgggatcttcacca
aggttgtgctggaggcgcccctgatcacggagagtgccctggaggtgattcgcaagtact
gcgaggatgagagtcgcacctacctgggcatgtccaccctccgagacctgatcttcaagc
gcccgtcccgccagttccagtacctgcacgtcctgctggacctcagctcccatgagaagg
acaaggtgcgctcccaggccctgctgttcatcaagcgcatgtacgagaaggagcagctgc
gagagtatgtggagaagtttgccctcaactacctgcagctcctggtccaccccaacccgc
catccgtgctgtttggagccgacaaggacacagaggtggcagcgccctggaccgacgaga
cagtgaagcagtgtctgtacctctacctggccctcctacctcagaaccacaagctgatcc
acgaactggcagctgtgtacactgaggccatcgccgacatcaagcggacggtgctgaggg
tcatcgagcagccggtgaggcccacccccagcccctcccctggtgtgtgcgcgatcgcgg
agcactgtccccaagctttaagatctattgtcaccaggtgccgcctcctcattctgcctg
cagtcccgccctccccggagctggtgaagcgcgtccgggatctctaccacaagcggctgc
ccgatgtccgcttcctcatccctgtgctcaacgggctggagaagaaagaagtgatccagg
ccctgccgaagctcatcaaactcaaccccatcgtggtgaaggaggtcttcaaccgcctgc
tgggcacccagcacggtgaagggaactcggccttgtccccgctgaaccctggagagctgc
tgatcgcattgcataacatcgactcggcaaagtgcgacatgaagtccatcatcaaagcca
ccaacctgtgctttgcggagcggaacgtgtacacatcggaggtgctggccgtggtgatgc
agcagctgatggagcagagtcccctgcccatgctgctcatgaggaccgtcatccagtccc
tgaccatgtacccccgcctggggggcttcgtcatgaacatcctgtcccgcctcatcatga
agcaggtgtggaagtaccccaaagtgtgggagggcttcatcaaatgctgtcaacgcacca
agccccagagcttccaggtcatcctgcagctgccaccccagcagctgggcgccgtgtttg
acaagtgcccagagctccgggagcccctgctggcccatgtccgctccttcaccccccatc
agcaagcacacatccccaactccatcatggccatcctggaggccagtggcaagcaggagc
cggaggccaaggagactcctgcagggcctctggaggaggatgacctggagcccctggcgc
cggcccccgccccggccccggcccccagacccccccaggacctcatgggcctgcggctgg
cccaggagaaggccttaaagcggcagctggaggaggaacagaagctgaagcctgggggag
tgggagccccctcttcctcctcggccaggccggcccccccgcagccggacgaagccgtgg
atttccgggaggaggggcccgagggggagaccccggccatcttcatcagcgtggacgagg
acccggggctgccggaggccgccttgctggactcgagcctcgaggggccgccgcctaagg
tagggctggctccgcggagcggcgaggaaggagcctaccggcgtgtgcgcgggcgggcaa
ccggccggcctgtctgcaagcctccctccgcggcgatgggggacccgccgcccgaccccg
agcagccgccgcccggcagctcccagggccccgagccgcggcgcagcggggaggccccct
tcgtccagttctcgctgcccccggaggggccgcgggccgagctcgaagccccgaggggca
gccaggaggggccgggggccgacgaggagccgccctcggactcccagcgcctggcctacc
tggacgaggacgaggacgggctgcaggccgagctcctggagcagctgcagcagggccggg
gcagcctcctccagcagctggaggcggccttccaggaccccccgcccgacgccgcgggcc
tgttcagctaccagcgagaggaccagccgttcggcgaggacgccctgcacgggccctacg
cgagcgatgacccttcgctccagttctcgccctccgagctgggcttcctgcccttcgaca
tggaggtgtcggagccggagccccgggagctggccgtgcagaacgccaaggcctacctgc
tgcagaccagcatcagctgcgacctgagcctgtatgagcacctggtgaacatgctgacca
aaatcctgaaccagcgcccagaggatcccttggccatcctggagtcgctgaaccgcacga
cacagttggagtggttccaccccaagctggactcgctgcgggatgaccccgagatgcagc
ccacctacgagatggccgagaggcagaagtcgctattcgtccggggcggcggcagtgcgg
agggcgagcaggagatggaggaggaggtggtagacacggccgtgcccaacgtcatggagt
cggccttctacttcgagcagggcggcgtgggcctgagttccgatgagagtttccgcctct
tcctggccctgaagcagctggtagagcagcagcccatccacacctgtcgcttctggggca
aaatcctggggctcaagcgcagctacctggtggccgaggtggagttccgggaaggcgagg
aggaggtggaggaggaggagatggaggagctgaccgagggtggcgagatcatggatgccc
acggcgaggaggagggcgaggaggacgaggagaaggccgccgacgtcatccccaagccgc
tctggaagcccccgcccgtcatccccaaggaggagagccgctcgggcaccaacaagtacc
tgtacttcgtgtgcaacgagcccggccggccgtggaccaagctgccgcacgtcacgccca
tccagatcgtgcaggcccgcaagatcaagaagttcttcaccggctacctggacgcancgg
tcatcagctacccgcccttcccgggcaacgaggccaactacctgcgggcccagatcgccc
gcatctcggcggccacgcacatcnagcccctgggcttctaccagttcaacgaggaggagg
gtgacgaggaggaggagggcggtgcagggcgagactccttcgaggagaacccggactttg
agggcgttcccgtgtttgagctggtggactccatggccaactgggtgcaccacatgcagc
acatccttccgcag
DBGET
integrated database retrieval system