Myotis lucifugus (little brown bat): 102434030
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Entry
102434030 CDS
T07795
Symbol
SNRNP200
Name
(RefSeq) U5 small nuclear ribonucleoprotein 200 kDa helicase isoform X1
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
mlf
Myotis lucifugus (little brown bat)
Pathway
mlf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102434030 (SNRNP200)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlf03041
]
102434030 (SNRNP200)
Enzymes [BR:
mlf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
102434030 (SNRNP200)
Spliceosome [BR:
mlf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102434030 (SNRNP200)
Complex C
U5 SnRNP specific factors
102434030 (SNRNP200)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
AAA_30
PhoH
SWI2_SNF2
DUF603
Motif
Other DBs
NCBI-GeneID:
102434030
NCBI-ProteinID:
XP_006102874
Ensembl:
ENSMLUG00000010493
LinkDB
All DBs
Position
Unknown
AA seq
2136 aa
AA seq
DB search
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK
PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI
QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT
DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL
SANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDR
ECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPELSKFL
YQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVFTQGS
HFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKT
LNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINPDGTINVDNFKIIY
IAPMRSLVQEMVGSFGKRLATYGITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKG
GERTYTQLVRLIILDEIHLLHDDRGPVLEALVARAIRNIEMTQEEVRLIGLSATLPNYED
VATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQ
VLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPY
GFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR
WTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDM
LNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTA
ALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSL
SSEFKNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMAD
MVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLPEEVV
KKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKV
ELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLITFFVPVFE
PLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESL
YQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQSSEGRCVYIT
PMEALAEQVYMDWYEKFQDRLSKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWK
QRKNVQNINLFVVDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDV
AHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVI
VFVPSRKQTRLTAIDILSTCAADIQRQRFLHCTEKDLIPYLEKLSNNTLRETLLNGVGYL
HEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMSVAAHLVIIMDTQYYNGKIHAYVDYP
IYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEI
VTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSK
CISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPI
RHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAI
RLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKGVE
SVFDIMEMEDEERNALLQLSDGQMADVARFCNRYPNIELSYEVVDKDGIRSGGPVVVLVQ
LEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATG
AHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtgaccgcccggagcctgcagtacgagtacaaagcgaactcgaatcttgtc
ctccaagctgaccgttctctcattgaccggacccgtcgggatgaacccacaggagaggtg
ctatccctggttgggaagctggagggcacccggatgggagataaggcccaacggaccaaa
ccacaaatgcaggaggaaagaagagccaagcgaagaaagcgtgacgaggaccggcacgac
atcaacaagatgaaggggtacactctgctctcggagggcatcgatgagatggtgggcatc
atctataagcccaaaaccaaagaaacccgggagacttacgaagtgctgctcagcttcatc
caggctgcgcttggggaccagccacgtgatattctttgtggggcagctgatgaagttcta
gctgtcctaaagaatgaaaagcttcgtgacaaggaaaggagaaaggagattgacctgttg
ctggggcagacagatgataccagataccatgtgctggtgaacttgggcaagaagatcaca
gactatggcggagacaaggaaatccagaatatggatgacaacattgatgagacctatggt
gtgaatgtacagtttgagtctgatgaggaggaaggcgatgaagatgtgtacggggaggtt
cgagaagaggcgtccgatgatgacatggaaggggatgaggctgtggtgcgctgcaccctc
tcagctaatcttgtagcctctggtgaactgatgagttctaagaagaaggatttgcatcct
cgggacattgatgcgttttggctgcagcggcagctcagtcgcttctatgatgatgccatt
gtatctcagaagaaggcagacgaagtgttggaaatcttaaagacggccagtgatgaccgg
gagtgtgagaaccagctggtgctcctgctcggtttcaatactttcgattttattaaagtg
ctgcggcagcacaggatgatgattttatattgcaccttgctggccagtgcacagagtgaa
gctgaaaaggaaaggatcatgggaaagatggaagctgatccagagttatctaagttcctc
taccaacttcacgagacggagaaggaggatctgatccgggaggagcggtcccggagggag
cgcgtgcggcagtcccgcatggacactgatctggaaaccatggatctggaccagggcggg
gaggcattggctccgaggcaggttctggacttggaggacctggtttttacccaagggagc
cacttcatggccaacaaacgctgtcagcttccggatgggtccttccggcgccagcgcaaa
ggctacgaagaggtgcacgtacctgctctgaagcccaagccctttggctccgaggaacaa
ctgcttccggtggagaagctgcccaagtacgcccaggctggattcgagggcttcaagacg
ctgaaccggatccagagtaagctctaccgggccgccctggagacagatgagaacctgctc
ctgtgcgcccccactggcgccgggaagaccaacgtggccctgatgtgcatgctccgcgag
atcgggaagcacattaacccggacggcactatcaacgtggacaacttcaagatcatctac
atcgccccgatgcgctccctggtgcaggagatggtgggcagctttgggaagcgcctggcc
acatacggcattactgttgcagaactgactggcgaccaccagctgtgcaaggaggagatc
agtgccactcagatcattgtctgcacccctgagaagtgggacatcattacccgcaagggt
ggggagcgtacctacacccagcttgtgcggctcatcattctggatgagatccacctcctc
catgatgacagaggtcctgtcttggaagctttggtggccagggccatccgaaacattgag
atgacccaagaggaagtcaggctcattgggctgagcgccaccctccccaactacgaagat
gtggccacatttctgcgtgttgatcctgccaagggcctcttctacttcgacaatagcttc
cgcccagtgcctctggaacagacctacgtaggcatcacagagaaaaaggctatcaagcgt
ttccagatcatgaatgaaatagtctacgagaagatcatggaacatgcagggaaaaatcag
gtgctggtgtttgtccactcccggaaggagactgggaagacggccagggccattcgggac
atgtgcctggagaaggacactctgggtctgtttctgagagagggctccgcctccacagaa
gttcttcggacggaggcagaacagtgcaagaacctggagctgaaggatctgctgccctat
ggctttgctattcatcatgcgggcatgaccagagtggacaggacactcgtagaggacctt
tttgctgataaacacattcaggttttagtttccacagcaactctggcttggggtgtgaat
ctccccgcacatacagtcatcattaaaggtacccaggtgtatagtccagagaaggggcgc
tggacagagctgggagcactggacattctgcagatgctgggacgagccggaagaccccag
tatgacaccaagggcgaaggcatcctcatcacatcgcatggggagcttcagtactacctg
tccctcctcaaccagcagcttcctattgagagccagatggtgtcaaagctgcctgacatg
ctcaacgcggaaatcgtgctgggaaatgtccagaatgcaaaggatgcagtgaactggctg
ggctatgcctatctgtatatccgaatgctccggtccccaaccctctacggcatctctcat
gacgacctcaagggagaccccctgctggaccagcgccggctggacctggtgcatactgct
gccttgatgctggataagaacaacctggtcaagtatgataagaagacaggcaacttccag
gtgacagaactgggccgtatagccagccactactacatcaccaacgacacagtgcagacc
tacaaccagctgctgaagcccactctgagcgagattgagctcttccgagtcttctcgttg
tcctcagagttcaagaacatcactgtgagagaggaggagaagctggaactgcagaagctg
ctggagagggtgcccattcccgtaaaggagagcattgaggaacccagcgcgaagatcaat
gtgcttctccaagccttcatctcacagctgaaactggagggctttgcactgatggctgac
atggtgtatgtcacacagtcggcgggccggttgatgcgggccatctttgaaattgtcctg
aaccgcggttgggcacagcttacagacaagaccctgaatctctgcaagatgatcgataaa
cgcatgtggcagtccatgtgtccgctgcgtcagttccgcaaactccctgaggaagtagtg
aagaagattgagaagaaaaacttcccctttgagcgtctgtatgacctgaatcataatgag
ataggggagctcatccgcatgccgaagatgggcaagaccatccacaaatacgttcacctg
ttccccaaattggagctgtcggtgcacctgcaacccatcacgcgctccaccctgaaggtg
gagctgaccatcacgccagacttccagtgggatgaaaaggtccatggttcgtccgaggca
ttctggattctggtggaggatgtggacagtgaggtgatactgcaccatgagtattttcta
ctcaaggccaagtatgcccaggatgagcacctcattacgttctttgtgcctgtctttgaa
ccactgccccctcagtacttcatccgcgtggtgtctgaccgctggctctcttgtgagact
cagcttccggtctccttccgacacctgatcctgccagagaaatacccacctcccactgaa
cttctggacctacagcccttgcccgtgtctgccttgagaaacagcgccttcgagagcctt
taccaagataaatttcctttcttcaaccccatccagacccaagtgtttaacacagtgtac
aacagtgatgacaacgtgtttgtgggagcacccaccggcagcgggaagaccatctgtgcg
gagttcgccatcctgcgcatgctgttgcagagctcggaggggcgctgtgtctacatcacc
cccatggaggcactggcagagcaggtgtacatggactggtacgagaagttccaggaccgg
ctcagcaagaaggtggtgcttctgacgggtgagaccagcacagacctcaagcttctgggc
aaaggcaacatcatcatcagtacccctgagaagtgggacatcctctctcggcgctggaag
cagcgcaagaacgtccagaacatcaacctcttcgtggtggacgaggtccacctcatcggg
ggcgagaatgggcctgttttggaagtgatctgctcccggatgcgctatatctcctcccag
attgaacggcctattcgcattgtggcacttagctcctcgctctcaaatgctaaggatgtg
gcccactggctggggtgcagtgccacgtccactttcaacttccacccgaatgtgcgccct
gtgcccttggagctgcacatccagggctttaacatcagccacacacagactcgcctgctg
tccatggccaagcccgtgtaccatgcaatcaccaagcactcgcccaagaagcctgtcatc
gtttttgtgccgtcccgcaagcagacccgcctcactgcaattgacatcctcagcacgtgt
gcagcggacatccagcggcagaggtttttgcactgcaccgagaaggacctgatcccgtac
ctggagaagctgagcaacaacacgctcagggagacgctgttgaatggtgtgggttaccta
cacgaggggctcagccccatggagcggcgcctggtggagcagctcttcagctcaggggcc
atccaggtggtggtcgcttctcggagtctctgctggggcatgagtgtggccgcccacctg
gtgatcatcatggacacccagtactacaatggcaagattcacgcgtacgtggactacccc
atctatgacgtgcttcagatggtggggcatgccaaccgacctctgcaggatgacgagggg
cgctgtgtcatcatgtgccagggctccaaaaaggatttcttcaagaagttcttatacgag
cccttgccagtggagtctcacctggaccactgcatgcatgaccacttcaacgctgagatt
gtcaccaagaccattgagaacaagcaggatgccgtggactacctcacctggacctttctg
taccgccgcatgacacagaaccccaactactacaacctgcagggcatctcccaccgccac
ctgtctgaccacttgtcagagctggtggagcagaccctgagtgacctggagcagtccaag
tgcatcagcatagaggatgagatggacgtggcacctttgaacctgggcatgatcgccgcc
tactattacatcaactacacaaccatagagctcttcagcatgtccctgaatgccaagacc
aaggtgcgggggctcatcgagatcatctccaatgcggctgagtacgagaacatccccatc
cggcaccatgaggacaacctcctgcggcagttggctcagaaggtcccgcacaagctgaac
aaccctaagtttaatgacccacatgtcaagaccaacctgctcctgcaggctcacctgtcc
cgcatgcagctgagtgctgagctgcagtcggataccgaggagatccttagcaaggcgatc
cggctcatccaggcctgtgtggacgttctctccagcaatgggtggctcagtcctgctctg
gcagccatggaactggcccagatggtcacccaagccatgtggtccaaggactcatacctg
aagcagctgccacacttcacctcagagcacatcaaacgctgcacagacaagggagtggag
agtgttttcgacatcatggagatggaggatgaagagcgaaatgcgctgcttcagctgtct
gacggccagatggcagacgtggcccgcttctgcaaccgctatcctaatattgagctctct
tacgaggtggtggataaggacggcatccgcagtggcgggcccgttgtggtgctggtacag
ctggagcgagaggaggaagtcacaggtcccgtgattgcacctctcttcccacagaaacgt
gaagagggctggtgggtggtgatcggagatgccaagtccaatagcctcatctccatcaag
aggctgaccctgcagcagaaggccaaggtgaagcttgacttcgtggccccggccactggt
gcccacaactacactctgtacttcatgagtgacgcttacatgggatgtgaccaggaatac
aaattcagtgtggatgtgaaagaagccgagacagacagcgactcggattga
DBGET
integrated database retrieval system
