KEGG   Myotis lucifugus (little brown bat): 102437146
Entry
102437146         CDS       T07795                                 
Symbol
PABPC5
Name
(RefSeq) polyadenylate-binding protein 5
  KO
K13126  polyadenylate-binding protein
Organism
mlf  Myotis lucifugus (little brown bat)
Pathway
mlf03015  mRNA surveillance pathway
mlf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mlf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    102437146 (PABPC5)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102437146 (PABPC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mlf03019]
    102437146 (PABPC5)
   03041 Spliceosome [BR:mlf03041]
    102437146 (PABPC5)
Messenger RNA biogenesis [BR:mlf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     102437146 (PABPC5)
   mRNA cycle factors
    Stress granule specific factors
     102437146 (PABPC5)
Spliceosome [BR:mlf03041]
 Complex C
  Other components
   Complex C specific factors
    102437146 (PABPC5)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_occluded RRM_MUD2_C RRM_10 RRM_7 RRM_3 YflT TC1
Other DBs
NCBI-GeneID: 102437146
NCBI-ProteinID: XP_006084772
Ensembl: ENSMLUG00000008244
UniProt: G1PZD8
LinkDB
Position
Unknown
AA seq 382 aa
MGSGEPNPAGKKKKYLKAALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPETRSPLG
YGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNR
ALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRF
KFPEERAAEVRTRDRATFTNVFVKNFGDEVDDEKLKEIFSEYGPTESVKVIRDASGKSKG
FGFVRYETHEAAQKAVLDLHGKSIDGKALYVGRAQKKIERLAELRRRFERLKVKEKSRPP
GVPVYIKNLDETIDDEKLREEFSSFGSISRAKVMVEVGQGKGFGVVCFSSFEEATKAVGE
MNGRMVGSKPLHVTLGQARRRW
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggggagtggggagcctaatcctgctggcaagaaaaagaagtacctcaaggctgccctg
tatgtgggtgacttggacccagatgtcaccgaggacatgctttataaaaagttcaggcct
gctggccctctgcgcttcaccagaatctgccgtgacccagagacccgcagccctctgggc
tatggctatgttaacttccgctttcctgcagatgctgagtgggccctgaacaccatgaat
tttgatctgattaatggaaaaccattccgcctcatgtggtctcagccagacgaccgctta
agaaagtctggagttggaaatatattcatcaaaaacctggacaaatccatagacaacagg
gctcttttttatttgttttctgcttttgggaacattctctcttgcaaagttgtatgcgat
gacaacggctctaagggttatgcctatgtgcactttgacagcctggcagctgccaataga
gccatctggcacatgaatggtgtgcggctcaacaaccgccaggtgtatgttggccgattc
aaatttccagaagagcgggcagctgaagttaggaccagggatagagcaactttcaccaat
gttttcgttaaaaactttggcgatgaagtagatgatgaaaaactgaaggaaattttcagt
gaatatgggccaaccgagagtgttaaggtaataagagatgccagtgggaaatctaaaggc
tttggatttgtaagatatgagacacacgaggctgctcagaaggctgtgctagacctgcac
ggaaagtccatcgatgggaaagccctatatgtagggcgagcacagaagaaaattgaacgt
ctggctgaattaaggcgaagatttgaaaggctgaaagtcaaagaaaaaagtcggcctccg
ggggtgcctgtctatattaagaacttggatgagaccatcgatgatgaaaaattaagggag
gaattttcttcctttggatcaattagccgagccaaagtgatggtggaagtggggcaaggc
aaagggtttggtgtagtctgtttctcctcttttgaagaggctaccaaagcagtgggtgag
atgaatggtcgcatggtgggctccaaaccgctgcatgtgaccctgggccaagccaggcgc
aggtggtga

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