Myotis lucifugus (little brown bat): 102438118
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Entry
102438118 CDS
T07795
Symbol
SCAF8
Name
(RefSeq) protein SCAF8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
mlf
Myotis lucifugus (little brown bat)
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlf03021
]
102438118 (SCAF8)
03041 Spliceosome [BR:
mlf03041
]
102438118 (SCAF8)
Transcription machinery [BR:
mlf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102438118 (SCAF8)
Spliceosome [BR:
mlf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102438118 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
102438118
NCBI-ProteinID:
XP_006093933
Ensembl:
ENSMLUG00000029190
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLY
VIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFK
SEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGLPDPWVSQIAN
TDTLTAVAQILQSPQGQQFQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQLTAAA
AAANTLNPLEQGVSFNKKLMDRFDFGEDSEHSEEPKKEIPTSQLSHVSESVNNSIFHQIA
EQLQQQNLEHIRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEANLDD
SIDIQQQDMDIDEGQDGAEEEIFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRK
RKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQV
DKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIGSKVI
KIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWETVKS
SEPVKETVQTTQSPPPVEKETVVTTQAEVFPPPVAVLQIPVAPAVPTVSLVPPAFPVSMP
VPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPPLSMTP
ETVKEVGFGSLVLPGGSVASSLAPSTLPAGTVFNPPPKQAEPEEKVPHLIDHQISSGENT
RSVIPNDIPSGSAILGGQPPNVTNNSGILGVQRPNAPSNSEMLGVRPSNVSSGSGIIGAQ
PPNILNNSGILGIQPSGVSSNSGLMGVLPPSLPNNSGLIGVQPPNVLNTSGPLGTQPPGG
PQNLPPLHLSNQRMPVMPMLDLRPGLIPQAPGPRFPLLQPGIPPQRGLPPPSMLDSALHP
PPRGPFPPGDIFSQPERPFLIPGRQSIDNIANPEKRIPLGNDNIQQEGDRDYRFPPIETR
ESMSRPPPVDVRDVIGRPVDPRDGPGRPPLDGRDHFVRPPVDIRENLVRPGMDHLGRRDH
FGFTPEKPWGHRDFDEREHRVLPVFAGPKGLHEERGRFRSGSYRFDPRSGPWNRGFQEVH
RDFDDRRRHWERQRDRDDRDFDFCREMNGNRLGRDRIQNTWVPPPHARVFDFFEGATSQR
KGDNVPQVNGENAERHAQPPPLPVQNEPELYEKLTSSNEINKEKSDTVADVESEPVVENT
ETEGT
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggacacaagaagcatactgtattccctgaatgactacaagccaccaatttcgaaagcg
aaaatgacccaaatcactaaagcagccatcaaagctattaagttctataaacatgtggta
cagagtgttgagaaattcattcagaaatgtaaaccagaatacaaggtacctggactttat
gttattgactccattgtacgacaatctcgacatcagtttggtcaagaaaaggatgtattt
gcacccagatttagtaataacatcattagcactttccagaatttatatcgttgccctggg
gatgacaagagtaaaatagtgagagtattgaatttatggcagaagaacaatgtatttaag
agtgagattattcagcctcttttggatatggcagcaggaattcctcctccagttgtcaca
cctgtcctggccagtactactgctgctatgagcaataccccaggaactcctgtgacacct
gttactccagccaatgtggtccaaggtttacctgatccatgggtatcccagatagcaaat
acagatacacttacagctgtagctcagatcttacaaagtcctcaaggccagcagtttcag
cagttaatacaaactttacagatacaacagcagaagccccagccttccatcctgcaggcc
ctggatgctggtcttgttgttcagttgcaggctctgaccgcacagcttacagctgcagct
gcagcagccaatacgctcaatcccttagaacagggagtgtcttttaacaagaagttgatg
gataggtttgattttggagaagattctgagcatagtgaagaacccaaaaaagaaattcca
acttctcaactttctcacgtttcagaatctgtgaacaattccatttttcatcagatagca
gagcaactacagcaacaaaacctagaacatatcaggcagcaactcctggaacagcaacag
cctcaaaaggcaacccctcaggatagtcaagaaggaacatttggatcagagcattccgcg
tcaccctcacaagggagcagtcaacagcatttccttgaacctgaagcaaatttggatgat
tccatagatattcagcaacaggacatggatatagatgaagggcaagatggagcggaagag
gagatctttgaacaagaagcaaagaaagtggctgttcgctcgagatcaagaacacattca
cgctctcgttcaaggtcaccaagaaaacgaaggtctaggtcacggtctggatctcgaaag
cgtaagcacagaaagcgatcacgctcacgctcaagagaaagaaagaggaaatcatcacgt
tcatactccagtgaaagaagagctagagaaagggagaaggaacgacagaagaaggggtta
cctccaattcggtctaaaacattaagtgtgtgtagcactaccctctgggttggtcaggtg
gacaagaaggcaacacagcaggatttaaccaacctgtttgaagagtttggacaaattgaa
tccattaatatgattcctcccaggggctgtgcttatgtctgcatggttcatcgacaagat
gcatttcgggctcttcagaagcttagttctggatcatataaaattgggtccaaggtcatt
aagattgcttgggctttaaacaaaggtgtaaaaacagaatacaaacaattctgggatgtg
gaccttggagttacatacataccatgggaaaaagttaaagtggacgacttggaaggtttt
gcagaaggaggcatgattgaccaggaaactgtaaatactgaatgggaaactgtgaaaagc
tcagaacctgttaaagagacggtccagacaactcagagcccacctcctgttgaaaaggaa
acagtggtcacaacccaggcagaggtttttcctccacctgttgctgtgttacagattcca
gtagcaccagctgtgcctacagttagtttagtcccaccagcatttcctgtgtcaatgccg
gttcctcctcctggattcagtccaatacctccacctccttttctacgagcaagttttaac
ccttcacaaccacctcctggttttatgccacctccagttccaccacctgttgtaccaccg
cctactattccaccagtagtaccaacatctttggtgcagccgccattatccatgactcca
gaaactgtgaaagaggttggatttggtagccttgttttaccaggtggttctgttgccagc
agtcttgctccttccactctgccagctggaactgtttttaatcctccccctaaacaagca
gagcctgaagaaaaagtacctcatcttatagatcaccagatctcttctggtgaaaacacc
agatcagtgattccaaatgatattccaagcggctctgcaattttaggaggacagccgcca
aatgtgacaaacaattctggaattcttggagttcaaagaccaaatgcaccaagtaattct
gaaatgcttggagtccggccatctaacgtttccagtggttctgggattattggagcccag
ccaccaaatattctaaataactctggaattttgggaatacaaccatccggtgtttcgagt
aattctggacttatgggagtactaccccccagtctccctaacaattctggacttatagga
gtacagccacccaatgttctaaatacatctggacctttgggaacacagccacccggtggg
cctcaaaatttaccccctttacatctctctaatcaaaggatgcctgtaatgccaatgtta
gaccttcgtccaggactaataccgcaggcacctggaccaagatttcctttgctacagcct
ggaattccaccccaacgaggactccctcccccatcgatgcttgattcagctcttcatcca
cctccccgtggtccttttcctccaggagatatttttagtcagccagaaagaccttttcta
attcctggaaggcaaagtatagacaatattgctaatccagaaaaaaggataccgcttgga
aatgataacattcaacaggaaggcgatagagattacaggtttcctcctatagaaaccagg
gaaagcatgagtagacctcccccagtggatgttagggatgtgattgggcggcctgtagat
cccagagatggtcctggaaggcctccattagatggcagggatcattttgtaaggcctcct
gtagatattagagagaatcttgtgaggccaggcatggatcatcttggtcgaagagaccac
tttggctttactccagagaagccatgggggcatagagattttgatgagagagagcatcgg
gttctacctgtctttgctggtccaaaaggcttacatgaagaaagagggagatttcggtct
ggaagctatcgatttgatcccagaagtggtccttggaacagaggatttcaagaagttcac
agagattttgatgaccgcagaagacactgggagaggcagagggatagggatgacagagat
tttgatttctgcagagaaatgaatggaaatcgtcttggacgagatagaattcaaaacacc
tgggtcccccctccccatgctcgggtttttgatttctttgaaggggccacttctcaacga
aaaggtgataatgtgcctcaggttaatggtgaaaatgctgagagacatgctcaaccacca
cctttaccagtacagaatgaacctgaactttatgaaaaactgacatcttcaaatgaaata
aacaaggagaagagtgacacagttgctgatgtagaaagtgaaccagtggtagaaaacaca
gaaactgaggggacataa
DBGET
integrated database retrieval system