Myotis lucifugus (little brown bat): 102438526 Help Entry 102438526         CDS       T07795                                  Symbol SPG11 Name (RefSeq) LOW QUALITY PROTEIN: spatacsin   KO K19026   spatacsin Organism mlf  Myotis lucifugus (little brown bat) Pathway mlf05014   Amyotrophic lateral sclerosis mlf05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:mlf00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     102438526 (SPG11)    05022 Pathways of neurodegeneration - multiple diseases     102438526 (SPG11)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:mlf03400]     102438526 (SPG11) DNA repair and recombination proteins [BR:mlf03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      102438526 (SPG11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  102438526 NCBI-ProteinID:  XP_023613367 Ensembl:  ENSMLUG00000005361 LinkDB All DBs Position Unknown AA seq 2444 aa AA seqDB search MAAKXSGSAAAGGFCSAATMERVLPMLLVPVPAEATGRLGSRAQLHREQEVLGSLTAAGS LQVLSLAAGGRGGGGCSLDGPFRHFVWEDSHNSSTPTDKPRLLALSENNELLIYEFNLKD GRCDGTILYNCSEETLQKLIEDQNVSISLLTLRILSFHNNTSLLLINKCIILHIMFPGKD AEIRVLNYFTLRLPAQAVDSIIDMQLCRGILFVLSSLGWIYIFDIVGGTHVAHVDLALHQ EDMCDEQQQEPAKISSFTSLKVSQDLDVVVIVGSSNSAIALNLNLYFRPHPGHPFLEKTL EEIPIEXXXXXXEDDPVNSDYNMKLTKFSFQVDRSWKAQLLSLNETIKSSTMEVSHCAPW FQDILHLEYPDSNNHCTNVPGWDFIPQDIMHSQYSFPQKSHAKTSDPGRAWKIMHISEQE EPIELRCMSVTGFTALFAWTVGKMGCTIVLWDLEIEGIQCFSLGKRCIPIDNSGDQQLCL VLTENGLSLILFGLTQEEFLNRLMIHGSASTVDTLCHLNDWGRCSIPIHALEAGIENRQL DTVDFFLKSKENLLNPSPKSSVPDQFDHFPSQLYLRNVEELTPALDLLCSAIRESNSETQ SKNFSEQLLNLTLSFLNKQIKELFIHSEELDEHLQKGVNILTSYINELRTFMIKFPWKLT DTVDEYDVNENVPKVKESTIWEKLSIEEVIANAILDNKIPEAQTFFRINSHPAQRLEELI KIGLDLVFDNLKKNNVKEASELLKNMGFDVKDQLLKICFYTTDKNIRDFLVEILKEKNSF SEKEKRTIDFVHQVEKFYSEHLQENMQIQSFPRYWIMEQDFFKHRSVLDSFLKYDHKDKL NKQNHRIALNWAQWWNQLTQESILLPRINPEEYKSYSPEALWRYLTARHDWLSITSWIGE FQTQNSYSSLQQNKWPPLTIDIIDQGTCCNNNMRNKILDELARNGIFLRSELEDFELFLQ RLNRIGGVMQDTLPVHNYKSKEGWDFHSHFILYCLEHSLQYLLYVYLDCYKLSPPNCSFL GKKELHETHPWFEFLVQCREVSSNLTDPKLIFQASLANAQILIPSNQASVSSMLLEGHTL LALATTMYAPGGVSQVVQNEENESCLKKVDPQLLKMALTPYPKLKTALFPQYTAPSVLPP DITLYHLIQSLLPFDPSRLFGWQSANTLAIGDVSSHLPHFSSPDLVNKYAIVERLNFAYY LYHGRPSFAFGTFLVQELTKSKTPKQLIQQVGNEAYVLGLSSFHIPSIGAACVCFLELLG LDSLRLRVDMKVANIILSYKCANEDAQYSFIRESLAEKLSKLAGGEKATTEELLVLLEEA IWNSIQQQEIKRLYSESSIQWALVVQFCRLHNIKLSTSYLRECAKANDWLQFIIHSQLHN YHPDEVKSLLQYFSPVLQDHLRLAFENLPSVSNSRMDSDQVCNKSPQELQKSKEERTDFF EILLRCSEEPNSWCWLLAEAVKQQAPILSVLASCLQDASAISCLCVWIIASVEDSIAAEA MGHIQDSLEGHTWDLEDFSVIWRTLLTRQKSKTLIRGFQLFFKDSPLLLMLEMYELCMFF KNYKEAKAKLLEFQKSLETLETAAIKVHAAIPVPWLKEQVCFLLKLMLQQCRTQYELGKL LQLFVGIEHLFSEGPDVKKLCILSHILKDTSIAINNVIITSYSLQNFQQECKSILEKLET NGQFALAKRVAELAELPVDSLVIEEVTQEMQTLKHIDQWSLKQTRIDFWKKCHENFKKNS ISSKAASSFFTAQALVAREYPTEEGQSSTEECHLLLTLAGHWLAQEDLVPVEELEELEKQ IWLCRITQHTLRGNQEEREPTFSQQISASGELSFDSLASEFSFSKLAALNTSKYLALNGL PSKETCENRLDWKEQESLNFLIGRLLDDGCVHEASRVCRYFHFYNQDVALVLHCRALASG EASVDDLQPEIHALLQSAELLEEEKEPRIPLRKVSSTSSLESQSFVMLPPSDEMVTNLET LTHKCLHGKNYCRRVLCLYELSKELGCSYTDVAAQDGEAILRAILASPQPDRCKRAQAFI STQGLEPDRVADLVAEEVTRELLSPSEGAGQKQMVTPAEESQAFLQLTTLCQDRTLVGMK LLEKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAARLLTDNHLAPNEEYGLV VRLLTGIGRYNEMTYIFELLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHN MIALCFSMCREIGENHEAAACIQLKLIESQPWEDSIKNGHQLKQLLLKALTLMLDAAESY AKDSCVRQALHCHRLTKLLTLQIHFLNTGQNTMLINLGRHRLTDCIMSLPRFYQASIVAE AYDFVPDWAEILYQHVILKGDFHYLEEFKQQRLLRTSIFEEISKKYKQHQPTDMTVKNLK KLLTYCEDIYLYYKLAYEHKLYDVVNMLLKDPQTGCCLKDMLAG NT seq 7335 nt NT seq  +upstreamnt  +downstreamnt atggcggcgaagtgatccggaagtgctgccgccggcggcttctgcagcgctgccaccatg gagcgggttctaccgatgttgttggtgccggtccccgctgaggccacggggcgtctggga agccgggcgcagctgcaccgagagcaggaggttctggggagcctgaccgccgcaggcagc cttcaagtgctttccttagccgcgggcggccggggcgggggtggctgctccctggacggc cccttccggcactttgtgtgggaggattctcataacagcagcacaccaacagataagccc agactgctcgctcttagtgaaaataatgaattgctcatctatgaatttaatttgaaagat ggaagatgtgatggaaccattttgtataactgtagtgaggagactttgcaaaagctcatt gaagatcaaaatgtcagcatttccttattaactttgagaattctgtcatttcacaataac acatcattattgctcatcaacaaatgtatcatcctgcacatcatgtttcctggaaaagat gctgagattagagtactcaactatttcacattacgcttgcctgcacaggctgtggacagt attattgacatgcagctctgcagaggaattctttttgttttgagtagtttaggctggatc tacattttcgacattgtgggtggtacacatgtagctcatgtggatttagcacttcaccaa gaagatatgtgtgatgagcagcaacaggagccagccaagatttcttcctttacttcactg aaagtgtctcaagacctagatgttgttgtgattgtcggctcctccaactctgcaattgct cttaacttaaacttgtatttcaggccacaccccggacacccatttttggaaaaaactcta gaagaaattcctattgaannnnnnnnnnnnnnnnacgaagacgatcctgtgaattctgac tacaacatgaaactgaccaagttttccttccaagttgataggtcttggaaggcccagcta ttatcattgaatgaaacaataaagagctccacaatggaggtttcccactgtgctccatgg ttccaggatattttgcatttggaataccctgactctaataaccattgtaccaatgtgcca ggttgggacttcattccacaggacataatgcacagtcagtatagttttccacagaaaagt catgccaagaccagtgatccaggaagagcatggaaaataatgcacatcagtgaacaagag gaacccatcgagcttagatgtatgtctgtgacaggattcactgccctgtttgcttggaca gtaggaaagatgggctgtaccattgtcctttgggatttggagatcgagggcatacagtgc ttttcccttggcaaaaggtgtattcctatagataatagtggagaccagcaactgtgcctt gttttgacagaaaatggactctctctgattttgtttggtttgacccaagaggagttttta aatagactaatgatccatggaagtgccagcactgtggacactctctgccatctcaatgat tggggcaggtgctcaatccccatacatgcactagaggcaggaatagaaaatcgtcagctg gacacagtagatttctttttgaagagcaaggaaaatcttttgaatccatccccaaaatct tctgtacctgatcagtttgatcactttccatcacaattatatttaagaaatgtggaagag ctgacaccagcattggatttactttgctcagcaattagagaaagtaattctgaaacccaa agcaaaaacttttcagaacaattacttaatcttacactgtccttccttaacaagcaaata aaggagctttttattcacagtgaagagttagatgaacatctacagaaaggagtgaacatt ttgaccagctacattaatgaacttagaaccttcatgataaagtttccttggaagctaaca gatactgtagatgaatatgatgtaaatgaaaatgtccccaaagtaaaggagagcactata tgggagaaactcagcattgaggaagttattgccaatgccattttagacaacaaaatacca gaggcacaaactttcttcagaattaatagtcaccctgctcaaagactcgaagagctgatt aaaattggcctcgatttggtctttgacaatttgaaaaagaacaatgtaaaggaagcctct gaacttttaaagaatatgggctttgatgtaaaagaccagttgctcaagatatgcttctat acaactgataaaaatatacgggactttttggttgaaattttaaaagaaaaaaattctttt tctgaaaaagagaaaagaactatagacttcgtgcatcaagttgagaagttttattcagaa catttgcaagaaaatatgcagatccagtcctttcccaggtattggataatggagcaagac tttttcaagcacaggtctgttttggactcattcctgaaatatgatcataaagataaactt aataaacagaaccacagaattgcattaaattgggctcagtggtggaaccaactaacacaa gaatctatcctccttcccaggataaatccagaagaatataaatcatattcccctgaagcc ctctggagatacctcacagctcgccatgattggctaagcattacctcgtggattggagaa tttcaaacccagaatagttattcttcacttcagcagaacaaatggcctcctctgactatt gatattattgatcagggtacttgctgcaacaacaacatgaggaataaaattttagatgag ctggccaggaatgggatttttcttagatctgaactagaagactttgaactcttcctccaa agactgaaccgtattgggggtgtgatgcaagataccctccctgttcacaactacaagtcc aaagaaggttgggatttccattctcacttcattctttattgtttggaacacagtctgcag tatcttctttatgtctatctcgactgttacaagcttagtcctccaaattgttcctttttg ggaaaaaaagaattacatgaaactcacccttggtttgaatttttagttcagtgtcgagaa gtttctagtaacttaacagatcctaaactgatcttccaggctagccttgcaaatgctcaa atactgattcccagcaaccaggccagtgtcagcagtatgctgttggaaggacataccctc ctggcccttgctaccacaatgtatgctcctggtggtgtcagccaggttgttcagaatgaa gaaaatgagagctgtttgaaaaaagtagatccccagctactgaagatggcattaactcct tatcccaagctaaaaactgctctcttcccacagtacactgcccctagtgtcctaccaccg gatattacactctaccaccttattcagtcattattgccttttgatcccagcagattgttt ggctggcagtctgccaacacactggctataggagatgtatcgagtcatctcccacatttc tctagccctgatctggttaataaatatgctatagtggaacgtctgaattttgcttattat ttatatcacggacggccatcatttgcatttggtacttttctggtccaggaattaactaag agcaagacccccaagcagctgatccagcaagtaggcaatgaagcctatgttttaggcctc tcttccttccacataccttcaataggagctgcctgtgtttgtttcttagaattgcttggg ctcgacagcctcaggctcagagttgatatgaaagtggccaatataattctgagctacaag tgtgcaaatgaagacgctcagtacagctttatcagagagtctctagctgaaaagctgtct aaactggctgggggtgaaaaagcaaccacagaagaattgcttgttctcttagaggaagcc atatggaacagtattcaacaacaggaaataaaaaggttatacagcgaatctagcatccag tgggcattggtggtacagttctgcaggctccacaatataaaactgagcacgtcttacctt agagaatgtgccaaagcaaatgattggttacagttcattattcacagccagctccataat taccacccagatgaggtgaaatctcttctccagtatttcagccctgtccttcaagaccac ttaaggctagcttttgagaacttgccctcagtgtccaactccagaatggatagtgatcaa gtctgcaacaagtccccccaggaactccagaaaagcaaagaagagagaactgatttcttc gaaattctgctccggtgctcagaggagccaaactcctggtgctggctcctggctgaagca gtgaaacaacaggcccctattcttagtgtcctagcctcatgtctgcaggatgccagtgct atttcttgtctctgtgtttggatcatcgcttctgtggaggacagtattgcagctgaagca atgggacacattcaggactcattggagggccatacatgggaccttgaggacttctcagtc atctggagaacattattaacaaggcagaagagcaaaactctcatcagaggattccagctt ttctttaaggattccccattactactgatgttggagatgtatgaactctgtatgttcttc aagaattataaggaagccaaagctaaactactggagttccagaagagccttgaaactctt gaaacagcagccataaaggtccacgctgccatccctgtcccatggctgaaggagcaggtg tgttttcttttgaagcttatgctgcagcagtgcaggacccagtacgagctgggaaagctt ttacagctgtttgttgggatagagcatctcttctctgagggtccagatgtaaagaagctg tgtatccttagccacattttgaaggatacatccatagccattaataatgtgattattacc agctatagccttcagaattttcagcaggaatgtaaatctattttggaaaaactggagaca aatggacagtttgctttggctaagagggtagcagaattagctgagttacctgtggacagc ttggttattgaagaggtaacacaggaaatgcagaccttaaaacacattgaccagtggtcc ctgaaacaaacaagaattgacttctggaaaaaatgccatgagaattttaagaaaaattcc atttcaagcaaagcagcttcttcctttttcacagcccaggcccttgtggcgcgtgagtac cctactgaggagggacagagcagcactgaggagtgccatctgctgctcaccctggcaggg cattggctcgctcaggaggacctggtccctgtggaggagctggaggagctggagaagcag atctggctctgccgtatcacccagcacaccctcagaggaaaccaggaggaaagagagccc acattttctcagcagatctcagctagtggtgaactttcctttgacagcttagccagtgag ttttcattctccaagttggctgccctgaacacatcaaaatatttagcacttaatggcctt ccatccaaagagacttgtgagaacagactagattggaaggagcaggagtcactaaacttt ttgattgggcgcctattggatgatggctgtgtgcatgaagccagtcgagtatgccggtac ttccacttctataaccaagatgttgccttggtactgcactgcagagcactggcttcaggg gaagctagtgtggatgacctacagccagagatccatgctctcctacaaagtgctgagctg ctggaggaagaaaaagaacctcgcattcctctaaggaaagtctcaagcacttcaagtttg gagagtcagtcatttgtgatgctgccccccagtgatgaaatggtgactaatctggaaact ctgacacacaaatgcctccatgggaagaactactgccgacgggtcctctgtctgtatgaa ctttccaaggagttgggctgttcctacacagatgttgctgctcaggatggtgaggccata ctccgagcaatcttggcctctccgcagcctgaccgatgcaagcgagcccaagccttcatc agcactcagggcctggagccagacagggtggctgaccttgtggccgaagaggtgacccgg gagctactgtccccatcagagggagcaggacagaagcagatggtcaccccagcagaagaa agtcaggcatttcttcagctaaccactttgtgtcaagaccgcaccttggtaggcatgaag ttgttggaaaagatttcctccgttccccatggggaattgtcctgcaccacagagctgctg attctggcccatcactgcttcacgctgacatgccacatggagggcatcattcgagttctg caggctgctcggctgctcacagacaaccacttggcccccaacgaggagtatgggctggtg gtgcgtctcctcactggcattggaaggtacaatgagatgacatacatttttgaattgctg cataaaaagcactacttcgaagtgctgatgaggaagaagttggatccgagtggtaccctg aagacagccctacttgactacatcaaacgctgccgccctggggacagtgagaagcacaac atgattgccctgtgcttcagcatgtgcagggaaatcggggagaaccatgaggcagctgcc tgcatccagctgaaactgattgagtctcagccctgggaggatagcatcaagaatgggcac caactgaagcagctgctactgaaggccctgactctcatgctggatgccgctgagagttat gcgaaggattcctgcgtgcgacaggccctgcactgtcacaggctcaccaagttgctaaca ctgcagattcactttctgaacactggccaaaacacaatgcttatcaacctaggtcgccac aggctgacggactgcatcatgtccctacctcggttctaccaggcttctattgtggctgag gcctatgactttgttcctgattgggctgaaattctataccaacatgtgattcttaaagga gactttcattacttggaagaatttaagcagcaaaggttattaagaaccagtatatttgaa gagatttcaaaaaaatataaacaacaccagcctactgatatgactgtgaaaaacctgaag aagttactcacatattgtgaagatatctacttgtattacaagctggcatacgaacataaa ctttatgatgttgtgaatatgcttctgaaggaccctcagacaggctgctgtctaaaggac atgctagcaggttag

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