Myotis lucifugus (little brown bat): 102439041
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Entry
102439041 CDS
T07795
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
mlf
Myotis lucifugus (little brown bat)
Pathway
mlf03015
mRNA surveillance pathway
mlf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102439041 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
102439041 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlf03019
]
102439041 (PABPC4)
03041 Spliceosome [BR:
mlf03041
]
102439041 (PABPC4)
Messenger RNA biogenesis [BR:
mlf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102439041 (PABPC4)
mRNA cycle factors
Stress granule specific factors
102439041 (PABPC4)
Spliceosome [BR:
mlf03041
]
Complex C
Other components
Complex C specific factors
102439041 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
ApbA_C
Motif
Other DBs
NCBI-GeneID:
102439041
NCBI-ProteinID:
XP_006099176
Ensembl:
ENSMLUG00000012068
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MNAAASSYPMASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGKSKGFGFVSYEK
HEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPSAIRQSGPRPALRHLAPTGNAPASRGLPTT
AQRVGSECPDRLAMDFGGAGAAQQGLTDSCQSGGVPTAVQNLAPRAAVAAAAPRAVAPYK
YASSVRSPHPAIPPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFPLIQTMHS
NLAGKITGMLLEIDNSELLHMLESPESLRSKVDEAVAVLQAHHAKKEAAQKVGTVAAATS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgccgccagcagctaccccatggcctccctgtacgtgggcgacctgcactcg
gacgtcaccgaggccatgctgtatgaaaagttcagccctgcggggcctgtgctgtccatc
cgggtctgccgcgacatgatcacccgccgctccctgggctatgcctacgtcaacttccag
cagccggccgacgctgagcgggccttggatactatgaactttgatgtgattaagggaaag
ccaatccgcatcatgtggtctcaaagggatccctctttgagaaaatcgggtgtgggaaac
gtcttcatcaagaacttggacaaatctatagataacaaggcactttatgatactttttct
gcgtttggaaacattctgtcctgcaaggtggtgtgtgacgagaatggctctaagggttat
gccttcgttcacttcgagacccaagaggctgcagacaaggccatcgagaagatgaacggc
atgctcctcaatgaccgcaaagtgtttgtgggcagattcaagtctcgaaaagagcgggaa
gccgagcttggggccaaagccaaggagttcactaatgtgtatatcaaaaactttggggaa
gaggtggatgatgagagtctgaaagagctgttcagccagtttggtaagaccttaagtgtc
aaggtgatgagagatcccactgggaaatccaaaggctttggcttcgtgagttacgaaaaa
cacgaggatgccaataaggctgtggaagagatgaatggaaaagaaatcagtgggaaagtc
atttttgtaggccgtgcacagaagaaagtggaacggcaggctgagttaaaacggaaattt
gaacaactgaagcaagagagaattagtcgataccagggggtgaatctctacattaagaac
ttggatgacaccattgacgatgagaagttaaggaaagagttttctcctttcggatccatc
accagtgctaaggtaatgctggaggatgggagaagcaaagggtttggctttgtctgcttc
tcatctcctgaagaggctaccaaagcagtcactgagatgaatggacgcattgtgggctcc
aagccactgtatgtcgccctggcccagaggaaggaagagcgaaaggctcacctgaccaac
cagtatatgcagagggtggccggaatgagagcactccctgccaatgccatcttaaatcag
ttccagcctgcagctggtggctattttgtgccagcagttccacaggctcagggaaggcct
ccatattacacacctaaccagttagcacagatgagacctaatccacgctggcagcaaggt
gggagacctcaaggcttccaaggaatgccaagtgctatacgccagtctgggcctcgtcca
gctcttcgccacctggctccaactggtaatgctccggcctctcgtggcctccctaccact
gctcagagagtcgggtctgagtgcccggaccgcttggctatggactttggtggggctggt
gccgcccagcaagggctgactgacagctgccagtctggaggtgttcccacagctgtgcag
aacttagcacctcgcgctgctgtggctgctgctgctccccgggctgttgcaccttacaag
tatgcctccagtgtccgcagccctcaccctgccataccacctctgcaggcaccccagcct
gcggtccatgtgcaggggcaggagcccctgaccgcctccatgctggctgcagcacccccc
caggaacagaagcagatgctgggcgaacgtttgttccctctcatccaaaccatgcattcg
aacctggctggaaagattacgggaatgcttctagagatcgacaactccgagctgctgcac
atgctggagtcccccgagtctctccgctccaaggtggatgaagctgtggcagtcctacag
gctcatcatgccaagaaagaagctgcccagaaggtgggcactgttgctgctgctacctct
tag
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