Myotis lucifugus (little brown bat): 102439703
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Entry
102439703 CDS
T07795
Symbol
PRKN
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
mlf
Myotis lucifugus (little brown bat)
Pathway
mlf04120
Ubiquitin mediated proteolysis
mlf04137
Mitophagy - animal
mlf04141
Protein processing in endoplasmic reticulum
mlf05012
Parkinson disease
mlf05014
Amyotrophic lateral sclerosis
mlf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102439703 (PRKN)
04120 Ubiquitin mediated proteolysis
102439703 (PRKN)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
102439703 (PRKN)
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
102439703 (PRKN)
05014 Amyotrophic lateral sclerosis
102439703 (PRKN)
05022 Pathways of neurodegeneration - multiple diseases
102439703 (PRKN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mlf04131
]
102439703 (PRKN)
04121 Ubiquitin system [BR:
mlf04121
]
102439703 (PRKN)
03029 Mitochondrial biogenesis [BR:
mlf03029
]
102439703 (PRKN)
Enzymes [BR:
mlf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
102439703 (PRKN)
Membrane trafficking [BR:
mlf04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
102439703 (PRKN)
Aggrephagy
Other aggrephagy associated proteins
102439703 (PRKN)
Xenophagy
Other xenophagy associated proteins
102439703 (PRKN)
Ubiquitin system [BR:
mlf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
102439703 (PRKN)
Mitochondrial biogenesis [BR:
mlf03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
102439703 (PRKN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
ubiquitin
Rad60-SLD
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
102439703
NCBI-ProteinID:
XP_023600481
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MIVFVRFNSSHGFPVEVDSATSIFQLKEEVAKRQGVPADQLRVIFAGKELRNDLVVQSCD
LGQQSIVHVVLRPGREGPAMATGRDRPRGTAGAFAREPESLTRVDFSSSVLPTDSAGLAV
ILHEDREGAARTAGRPAGRPAYNSFYVYCKGPCQRVQPGKLRVRCGTCQQATLTLAQGPS
CWDDVLIPKRMRGECQSPGCPGTSAEFFFKCSAHPTSDKETSVALNLITTNSRGITCITC
TDIRSPVLVFQCNHRHVICLDCFHLYCVTRLNDRQFVHDPQLGYSLPCVAGCPDSLIKEL
HHFRVLGEEQKRNQVCHNQNECGRGISEQFLPGPLPAITARRGCVLRIGRRAGAPAPAVA
PGCSPEPGQRKVTCEAGGLGCGVSTAAPVSLFRVGCFGN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtgttcgtgaggttcaactccagccacggtttcccagtggaggtggattctgcc
accagcatcttccagctcaaggaggaggttgctaagcgacagggggttccagccgaccag
ctgcgcgtgattttcgcggggaaggagctcaggaatgacctggtggttcagagctgcgac
ctgggccagcagagcatcgtccacgtggtgctgagacccgggagagaaggccccgcgatg
gccaccggccgggaccgtccccggggcactgcgggggccttcgccagggagcccgagagc
ttgacccgcgtggacttcagcagctccgtgctccccaccgactccgcgggcctggccgtc
attctgcacgaggacagggagggcgctgcgcgaacagcgggcagaccagcaggtagaccg
gcctacaacagcttctacgtctactgcaagggcccctgccagcgggtgcagcccgggaag
ctccgggtgcggtgcggcacctgccagcaagccacgctcaccttggcccagggcccgtcc
tgctgggacgacgtcctgatcccgaagcggatgaggggcgagtgccagtcgccaggctgc
cccgggacaagcgcggaatttttctttaaatgttcagcgcacccgacctctgacaaagaa
acatcagtagctttgaacctgatcacaaccaacagccggggcatcacctgcatcacgtgc
accgacatcaggagcccggtcctggttttccagtgcaaccaccgccacgtgatctgcttg
gactgcttccacctgtactgcgtgaccaggctcaacgaccggcagtttgtccacgacccg
cagctgggctactcgctgccgtgtgtggccggctgccccgactccttgatcaaagagctc
catcacttcagggtcctcggggaagagcagaaaaggaaccaagtgtgccacaaccagaac
gagtgtggtagaggcatctccgagcagttcttaccgggccccttaccagccattacggcg
cggagggggtgcgtcttgcgcattgggcggcgtgctggtgcccccgccccggctgtggcg
ccgggctgctcccccgagcccgggcagcggaaggtcacctgcgaggccggcggcctgggc
tgcggggtgagtactgcggcccccgtgtcgcttttccgtgttggctgcttcggcaactga
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