KEGG   Myotis lucifugus (little brown bat): 102440448
Entry
102440448         CDS       T07795                                 
Symbol
SEC13
Name
(RefSeq) protein SEC13 homolog isoform X1
  KO
K14004  protein transport protein SEC13
Organism
mlf  Myotis lucifugus (little brown bat)
Pathway
mlf03013  Nucleocytoplasmic transport
mlf04141  Protein processing in endoplasmic reticulum
mlf04150  mTOR signaling pathway
mlf05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:mlf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102440448 (SEC13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102440448 (SEC13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    102440448 (SEC13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    102440448 (SEC13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mlf03019]
    102440448 (SEC13)
   04131 Membrane trafficking [BR:mlf04131]
    102440448 (SEC13)
Messenger RNA biogenesis [BR:mlf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102440448 (SEC13)
Membrane trafficking [BR:mlf04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    102440448 (SEC13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    102440448 (SEC13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    102440448 (SEC13)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_RIG_2nd EIF3I ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_EML NBCH_WD40 MIOS_WD40
Other DBs
NCBI-GeneID: 102440448
NCBI-ProteinID: XP_006083906
Ensembl: ENSMLUG00000004901
LinkDB
Position
Unknown
AA seq 322 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWDVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIK
KFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSVSASVTEGQQNEQ
NT seq 969 nt   +upstreamnt  +downstreamnt
atggtgtcagtaattaacactgtggacacctcccatgaggacatgattcacgatgcccag
atggactactatggcacccgcctggcaacctgctcatcagacaggtccgtcaaaatcttt
gatgtacgcaacggagggcagatcctcatcgcagacctcaggggtcatgagggaccagtg
tggcaagtggcctgggcccaccccatgtatggcaatatcctggcatcctgctcctatgac
cggaaagtcattatctggaaagaggaaaacggcacctgggagaagacgcatgagcacaca
ggacacgactcctcagtaaattctgtgtgctgggccccccatgactacggcctaatcctg
gcctgtgggagctcagatggggccatctccctgctgacctacactggggaaggccagtgg
gacgtgaagaagatcaacaatgctcacactatcggctgcaatgccgtcagctgggcccct
gctgttgtacctggaagcctcatagaccagccatcaggacagaagcccaactacatcaag
aaatttgcctcaggcggctgtgacaacctcatcaagctgtggaaggaggaagaggatggc
cagtggaaggaggaacagaagctggaagcacacagtgactgggttcgagacgtggcctgg
gccccttccattggtctacccaccagcaccatcgccagttgttcccaggatggtcgtgtg
ttcatttggacctgtgacgatgcctcaagcaatacgtggtctcccaaactactgcacaag
ttcaatgatgttgtgtggcacgtgagttggtccatcacagccaacattctggccgtctcg
ggtggagataataaggtgaccctgtggaaggagtcagtcgacgggcagtgggtgtgcatc
agtgacgtcaacaagggccagggttccgtgtctgcttccgtcacagagggccagcagaac
gagcagtga

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