Myotis lucifugus (little brown bat): 102441940
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Entry
102441940 CDS
T07795
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X2
KO
K12821
pre-mRNA-processing factor 40
Organism
mlf
Myotis lucifugus (little brown bat)
Pathway
mlf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102441940 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlf03041
]
102441940 (PRPF40B)
Spliceosome [BR:
mlf03041
]
Complex A
U1 snRNP components
U1 related factors
102441940 (PRPF40B)
Complex B
102441940 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
102441940
NCBI-ProteinID:
XP_006091592
Ensembl:
ENSMLUG00000006364
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
METSKLKMTSKGRSQLALGWWKREQTYPGLRAGSGQEVGLGDSFSEVYAPFLSSPLCFPF
ANAHLFAYPGSYDFSLPQQSVPDSGPRPPAAPAPFPPGPPMMPPPFMPPPGIPPPFPPMG
LPPMSQRPPAIPPMPPGIMPPMLPPMGSPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPG
VDTASSAVAGTGPLRALWSEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQSPWK
EYKSDTGKPYYYNNQSKESRWTRPKDLDDLEALVKQEAVGKQQQQPQTLQTQPPQPQPEP
PPAPPGPTPLPMSLLEPEPGGNEDCDVSDAVQPLEQGFLQQPEEGPSSSAAQHQPPQQEE
EESKLEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSE
KKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVW
AVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQY
LMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQT
FLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEK
KIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEARERERE
KEEARRLRRREAAFRSMLRQAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREF
LQVLETECQHLHMKGRKHGRKGKKHHRKRSHSPSGSESEEEELPPPSLRPPKRRRQNPSE
SGSEPSSSLDSFESGGAALGGRGSPSSRLLLGSDHGLRRAKKPKKKAKKRRHKSNSPESV
TDPEEKAGKESDEKEPEQDKDRELRLAELPNRSPGFGIKKEKTGWDTSESELSEGELERR
RRTLLQQLDDHQ
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttctaaattaaagatgacatcgaagggacgcagccagctggctctgggctgg
tggaagagagagcagacatatccagggctcagagctgggagtgggcaggaagttggtctt
ggagactctttctctgaagtttatgctccttttttatcctcacccctctgtttccctttt
gcaaacgcccatctctttgcctatcctgggtcctatgacttttctctccctcaacagtcg
gttcccgattctggtccccggcccccagcagcgcctgcccccttcccaccggggcccccc
atgatgccaccacccttcatgccccctccaggaatccctccgcccttccctccgatgggg
ctaccgcccatgagtcagagaccaccagccatcccccccatgccacctggcatcatgccc
ccaatgctaccaccaatggggtcaccaccaccactcacacagataccaggaatggttcct
cccatgatgccaggaatgctgatgcctgcagtgcctgtcaccgcagcgacggctccaggt
gtggacaccgccagctctgctgtggctgggacaggccctctgagggccctatggagtgag
catgtagcccctgatgggcgcatctactactacaatgctgacgacaagcagtccgtgtgg
gagaagcccagcgtgctcaagtccaaggcggagctgctgctgtcccagagtccctggaaa
gagtacaagtcggacacaggcaaaccttactactataacaaccagagtaaggagtcccgc
tggacccggccgaaggacctggatgacctcgaggctctagtcaaacaagaggctgtaggg
aaacagcagcagcagccccagacactacagacacagcctcctcagccacagcctgagccc
ccacctgcgcctcctggccccaccccactgcctatgagcctcctagaacctgagccaggt
gggaatgaagattgcgatgtgtcagacgctgtccagcccctggagcaggggttcctgcag
cagccagaggagggccccagcagttctgctgcacagcatcagccaccacaacaggaggaa
gaagaatcaaagctagaaccagagaggtctggcctcagttggagtaaccgtgagaaggca
aagcaggcctttaaggagctgctgagggacaaggctgtcccctccaatgcctcatgggaa
caggccatgaagatggtggtcaccgacccccgttacagtgccttgcccaaattgagtgag
aaaaagcaggcatttaatgcctacaaggcgcagcgggagaaggaggagaaggaagaggcg
cgactgagggccaaggaggccaagcagaccttgcagcacttcctggagcagcatgagcgc
atgacctccaccacccgctaccggcgggcggaacagacctttggggagctggaggtctgg
gctgtggtccccgagagggatcgaaaagaggtttatgatgatgtcctcttcttcctggcc
aagaaggagaaggaacaggccaagcagctccggcgccgcaatatccaggccctgaagagc
atcctggatgggatgagtagcgtcaacttccaaaccacatggtcccaagcccagcagtac
ctcatggataaccccagctttgctcaggaccatcagcttcagaacatggacaaggaagat
gcgctgatctgctttgaggagcacatccgagctttggagagggaggaggaggaggagcgg
gagcgggcccggcttagggagcggcgccagcaacgcaagaaccgggaggccttccagacc
ttcctggatgagctgcatgagacagggcagctgcactctatgtccacctggatggaactg
tacccagcggtcagtactgatgtccgctttgccaacatgctgggccagccgggctccacc
cctctggacttgttcaagttctatgtggaggagttgaaggcacgattccatgatgagaag
aagatcattaaggacatccttaaggaccggggcttctgtgtggaagtgaacacagccttt
gaggacttcgcccacgtcataagctttgacaagagggctgctgcgctggacgcaggcaac
atcaagctgaccttcaatagtctactggagaaagcagaggcacgggagagagagcgggag
aaggaggaggcacgaaggctgcggcgcagggaagctgcctttcgaagcatgctgaggcag
gccgtgcctgctctggagctgggcactgcttgggaagaggtccgtgagcgctttgtgtgc
gactcagcctttgagcagataacccttgagtcggagcggatccggctcttccgggagttc
ctgcaggtactggagactgaatgccagcacctccacatgaaaggccggaagcacggcaga
aagggcaagaagcaccatcgcaagcgttcccactcgccctcaggctccgagtcggaagag
gaggagctgcccccaccatctctccggccccccaagcggaggcggcagaacccctccgaa
tctggctctgagccctcttcctcacttgattcatttgaaagtgggggtgctgcccttgga
ggacggggctccccatcctcccgccttctccttggatcagatcatggccttcggagagcc
aagaaaccaaaaaagaaagctaaaaagagaagacacaagtcgaacagtcctgagagtgtg
acagacccggaggagaaagctggcaaggagagtgatgagaaagaaccagaacaggacaag
gacagggagctccggctggctgagctccctaatcgctccccaggttttggaatcaagaag
gagaagacgggctgggacacatcagaaagtgagctgagtgagggtgagctggaaaggcgg
cggcggacactcctacagcagctggatgaccaccagtga
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