Myotis lucifugus (little brown bat): 102442467
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Entry
102442467 CDS
T07795
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF1-like
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mlf
Myotis lucifugus (little brown bat)
Pathway
mlf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102442467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlf03019
]
102442467
03041 Spliceosome [BR:
mlf03041
]
102442467
Messenger RNA biogenesis [BR:
mlf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102442467
Spliceosome [BR:
mlf03041
]
Complex B
Other components
Prp19-related factors
102442467
Complex C
102442467
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
Suf
TPR_8
TPR_15
TPR_19
ARM_TT21
ARM_TT21_C
TPR_7
TPR_NPHP3
DHR-2_Lobe_A
TPR_1
Motif
Other DBs
NCBI-GeneID:
102442467
NCBI-ProteinID:
XP_014306761
LinkDB
All DBs
Position
Unknown
AA seq
852 aa
AA seq
DB search
MARLSEQERPDLVFDEEDLHYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERALKL
LPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFLVDQ
GRITHTRRTFNRVLRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESAEEY
IEYLKSSDRLDEAAQCLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNVDAI
IRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYAQFE
ESMIAAKMETTSELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHRVHEWHKR
VALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEKATK
VSFKQVDDLASVWCECSELELRHENYDQALRLLRKATALPARQVEYFDGSEPVQNRVYKS
LKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKAYEC
GISLFKWPNVSDIWSTYLTKFIACYGGRKLERARDLFEQALDGCPPKYAKTLYLLYAQLE
EEWGLARHAMAVYERATQAVEPAQQYEMFNIYIKRAAEIYGVTHTRSIYQKAIEVLSDEH
AREMCLRFADMECKLGEIDRARAIYSFCSLICDPRTTGAFWQTWKDFKVRHGNEDTIREM
LRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDEMKLLEQRAEQLAAEA
EHDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEEEMDLEPSEVRLEQQS
VPAAVFGSLKED
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgactttcggagcaggagcggcccgaccttgtctttgatgaagaagacctccac
tatgaggaggaaattatgcggaaccagttttcggtcaaatgctggctccgctacattgag
ttcaagcagggggccccgaagcccaggctcaatcagttgtacgagcgagcgctgaagctg
ctgccctgcagctacaaactctggtaccgctacctgaaagcacgcagggcacaggtgaag
catcgctgtgtgactgatcctgcctatgaagatgtcaacaactgccacgagagggccttt
gttttcatgcacaagatgccacgtctatggctagattattgtcagttcttggtggaccag
ggccgtatcactcacacacgccgcactttcaaccgtgtcctccgggcgctgcctatcaca
cagcactctcgtatttggcctttgtacttgcgcttcctgcgctcacacccactacctgag
acagccgtgcggggctaccggcgcttcctcaagctgagccctgagagcgcagaggaatac
atcgagtacctcaagtcaagtgaccggctggacgaggctgcacagtgcctggccaccgtg
gtgaatgatgagcgcttcgtctccaaggctggcaagtccaactaccagctgtggcatgag
ctctgtgacctcatctcccagaacccggacaaggtgcagtcgctcaatgtggacgccatc
atccgagggggccttacccgcttcacagaccagctgggcaagctctggtgttcactggct
gactactacatccgcagtggccattttgagaaggctcgggacgtgtacgaggaggccatc
cggaccgtgatgaccgtgcgggacttcacccaggtgtttgacagctatgcccagttcgag
gagagcatgattgcagcgaagatggagaccacctcggagctggggcgggaagaagaggat
gacgtggacttggaactgcgcctggcccgctttgagcagctgatcagtcggcggcccctg
ctcctcaacagcgtcttgctgcgccagaacccgcaccgtgtccatgagtggcacaagcgt
gtggccctgcaccagggccgcccccgggagatcatcaacacgtacacggaggctgtgcag
acagtggaccccttcaaggctacgggcaaaccccatacgctgtgggttgcatttgccaag
ttttatgaggacaacgggcagctggatgatgcccgcatcatcctggagaaggccaccaag
gtgagcttcaagcaagtggatgacctggcaagtgtgtggtgcgagtgtagtgagctggag
ctcaggcatgagaattatgaccaggccttgcggctgctgaggaaggcaacagcactgccc
gcccgccaggtagagtattttgacggctcggagcctgtgcagaaccgtgtgtacaaatca
ttaaaggtgtggtccatgcttgcggacttggaggaaagccttggcacctttcagtctacc
aaggctgtatacgaccgtattctggacctgcgcatcgctaccccccagatcgtcatcaac
tatgccatgttcctggaggagcacaagtacttcgaggagagcttcaaggcgtacgagtgt
ggcatctcgctgttcaagtggcccaatgtgtctgacatctggagcacctatctgaccaaa
ttcatcgcctgctatgggggtcgcaaactggagcgggctcgggatctctttgagcaggcg
ctggatggttgccccccaaaatatgcaaagaccctgtacctgctgtacgcacagctggag
gaagagtggggcctggcccggcacgcaatggccgtgtacgagcgtgccacccaggccgtg
gagcctgcccagcagtacgagatgttcaacatctacatcaagcgggcagcagagatctat
ggagtcacccacacccgtagcatctaccagaaggccattgaggtgctgtcggacgagcat
gcccgggagatgtgcctgcggtttgcagacatggagtgcaagcttggagagattgaccgc
gcccgggccatctacagcttctgctccctgatctgtgaccctcggacaactggggccttc
tggcaaacatggaaggacttcaaggtacggcatggcaacgaagacaccatcagggagatg
ctgcgtatccgcagaagtgtgcaggccacttataacacacaggtcaacttcatggcctcg
cagatgctcaaggtgtcgggcagtgctacaggcactgtgtccgaccttgcccctggccag
agtggcatggatgaaatgaagctactagagcagcgggcagagcagctggcagccgaggcc
gagcacgaccagcccccacgggcccagagcaagatcctgttcgtgaggagcgatgcgtcc
cgggaggaactggctgagttagcgcaacaggccaatccggaggagatcgagctgggggag
gatgaggacgaggaggagatggacctggagcccagtgaggtgcggctggagcagcagagt
gtgccggctgctgtgtttgggagcctgaaggaagactga
DBGET
integrated database retrieval system
