Methylovirgula ligni: CWB41_02330
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Entry
CWB41_02330 CDS
T05824
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mlg
Methylovirgula ligni
Brite
KEGG Orthology (KO) [BR:
mlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlg03016
]
CWB41_02330
Enzymes [BR:
mlg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CWB41_02330
Transfer RNA biogenesis [BR:
mlg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CWB41_02330
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QAY94721
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All DBs
Position
complement(500587..501201)
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AA seq
204 aa
AA seq
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MTINFHKGDLPDGLSFGDSVAIDTETLGLVPYRDRLCVVQLSGGDGNAEIVQIAAGQTQA
PNLTRLLADPGVTKLFHYARFDIAVLYRAFGIMAGPLYCTKIASKLTRTYTDRHGLKDLV
RELLSVDLSKQQQSSDWAADSLSEAQLAYAASDVLHLHALRTRLDAMLARENRTEIAAAC
FQFLPTRAKLDLLGWPDSDIFSHE
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcaatttccacaagggcgatctcccggacggcctgagctttggtgacagcgtc
gccatcgataccgagaccctgggcctcgtgccttaccgtgaccgtctttgcgtcgtgcaa
ttgtccggcggcgacggcaatgcggaaatcgtccagatcgcggcggggcagacacaggcg
ccgaatctgacgcggctgctggccgatcccggcgttaccaaattattccactacgcgcgg
ttcgacatcgcggttctctaccgggccttcggaatcatggcgggaccgctctattgcacc
aagatcgcctcgaaactgacccgcacctataccgaccggcatgggcttaaggatcttgtc
cgagagcttctgagcgtcgacttgtcaaaacagcagcaatcctcggactgggcggcggac
tcgctgagcgaggcgcaactggcctatgcggcctccgatgtgctgcatctccatgccctg
cgcacccggctcgacgccatgctggcgcgggaaaaccggaccgaaattgccgcggcctgc
ttccagtttttgccgacgcgcgccaagcttgatctcctcggctggccggattcggacatt
ttctcgcacgaatag
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