Methylovirgula ligni: CWB41_03380
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Entry
CWB41_03380 CDS
T05824
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mlg
Methylovirgula ligni
Brite
KEGG Orthology (KO) [BR:
mlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mlg03016
]
CWB41_03380
Enzymes [BR:
mlg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CWB41_03380
Transfer RNA biogenesis [BR:
mlg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CWB41_03380
Prokaryotic type
CWB41_03380
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QAY94896
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All DBs
Position
712484..713383
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AA seq
299 aa
AA seq
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MNAPRSKRTEINGWVVLDKPVGMTSTHAVTRLKRLFNAKKAGHAGTLDPLASGVLPVAFG
EATKTVPFVQDGEKAYRFTIQWGAETDSDDADGQITAQSEVRPQTEAILAALPHFTGTIL
QLPPAFSAIKIAGERAYDIARDGEIPQLTPRPVTIHELVLVSLGRDEATFEARCGKGTYV
RAIARDLGRVLGCYGHVTALRRTRVGPFSETDAVPLAQIEEAAAPEAMRRVEAGLEELPQ
VIVDRDSAARLRRGQSVLLRGRDAPGEGAAYASCGGVVVAIGAIERGELVPGRVFNLPF
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgccacgctccaagcgtaccgaaatcaacggctgggtcgtgctcgacaagccg
gtcggcatgacctcgacccatgccgtcacgcggctgaagcggctcttcaacgccaagaag
gcgggccacgccggcacgctcgacccgcttgcctcgggcgtgctgccggtcgccttcggc
gaggcgacgaagaccgtgccctttgttcaggatggcgagaaggcctaccgcttcacgatc
caatggggcgcggagacggattccgacgacgccgacggccagatcaccgcgcaatccgag
gtgcggccgcagaccgaggccatcctcgcggcgctgccgcacttcaccggcacgatcctg
caattgccgcccgccttttcggcgatcaagatcgccggcgagcgcgcctatgatattgcc
cgcgacggcgaaattcctcagcttacgccgcgtccggtgacgatccacgaactcgttctg
gtctctctcggccgcgacgaagcgacgttcgaggcgcgctgcggcaagggcacttatgtg
cgcgccattgcccgcgacctcggccgcgtgctcggctgttatggccatgtcacagccttg
cggcgcacacgcgtcgggcctttctccgagacggatgccgtgccgctggcgcaaatcgaa
gaggcggcggcgccggaggcgatgcgccgggtcgaggcgggtcttgaagaattgccgcag
gtgattgtcgatcgcgattcggcggcgcggctgcggcgcggccagtctgtcctgctgcgc
ggccgcgacgcgccgggcgagggcgcggcttatgcgtcctgcggcggcgtcgtcgtcgcc
atcggcgcgatcgagcgcggcgagctggtgccgggtcgcgtctttaatctgccgttctag
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