Methylovirgula ligni: CWB41_04280
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Entry
CWB41_04280 CDS
T05824
Name
(GenBank) hypothetical protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
mlg
Methylovirgula ligni
Brite
KEGG Orthology (KO) [BR:
mlg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mlg03000
]
CWB41_04280
Transcription factors [BR:
mlg03000
]
Prokaryotic type
Helix-turn-helix
Other families
CWB41_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
GAF
HTH_30
HTH_23
HTH_50
HTH_28
AAA_25
PAS_7
Mga
AAA
HTH_AraC
HTH_29
HVO_A0261_N
HTH_22
Motif
Other DBs
NCBI-ProteinID:
QAY95043
LinkDB
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Position
895076..896971
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AA seq
631 aa
AA seq
DB search
MRSGLMSLARDGNRLMNSPSIKRHHASQVLALATRGHRAKDIATSWQRCLEVYRLDPERK
EPIHILTSLELREARDPLDYLLSIAEQPLMELSRQVAAAGYIVMLTDATGVVLNTKAAGD
TTPFGRWGLATGAIWSEQNEGTNGVGVCLAERRPITVHREEHFRSSYVGLTCSVTPIFDP
VGRLIGGLDISSGDSRIDELVIAFAQAATNQTAARLESELFRHTYKNCWIASIAESPEGC
ALIAFNKDRQLVGANRLARTLLGLDDDRIQRGIEIVEAGFRDFPLNAQQQLVEVDGSSAL
VIDRSAQIEFPRSRPRPGALEPAPSDLVALAGGGAQTSDSIRRVVSSVRQGIPALIFGET
GTGKERFARALHAYLAAPGEPFIRFDCEAFAGTMRNCENDKCDDFEERVRAAESGTLFLD
CLGALPSSAQTRLLDFLLEERPLQVDKCKGRPARIISASRADIEDKVRNGSFRSDLYYIL
RGATLELPPLRSRHEKPALIKRLLQEVDPQLHLSDDALQLLMNYTWPGNIRELGLVLHVA
AASCSNQIITARDIDVVAVKHENADAPGEGQPGSTIAAAERSVVLKQLENNNFDIAKTAA
ALGMSRATLYRRMKRYNVTKVIVARPSIEKF
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgagaagtggcttgatgtccttggcccgtgacgggaacaggttgatgaattcgccttca
atcaaaaggcaccatgcaagccaggttctggcgctcgccacgcgcggacaccgggccaag
gacatcgctacttcctggcaacgctgcctcgaagtgtatcggctcgaccctgagcggaaa
gagccgatccatattctgacgagcctcgagctgcgcgaagcgcgcgatcctctcgattat
cttctgtcgatcgccgagcagcccctgatggagctcagccgccaggtggcggccgccggc
tacatcgtcatgctaacggatgcgacaggtgtcgtgctgaacaccaaggccgccggggat
accacgccatttggcaggtggggtctggccaccggcgcgatctggagcgagcagaacgag
ggcaccaacggcgtcggcgtctgcctcgccgaaaggcgtccaattacggtccatcgcgaa
gagcattttcgctccagctatgtcggcctgacctgctcggtcacacccattttcgatccg
gtcgggcggctcatcggcggcctcgacatttcctcgggcgattcgcgtattgacgagctc
gtcatcgccttcgcccaagcggctacgaatcaaacggccgcacggctcgagagcgagctt
tttcgtcacacctacaagaattgctggatcgcttcgatcgcggagtcacccgaggggtgt
gcgcttatcgcattcaacaaggaccgtcagctcgtcggcgccaacaggttggcgcgcacg
ctgctgggcctcgacgacgataggatccagcgcggcatcgaaatcgtcgaggcgggcttt
cgcgacttccccctgaacgcgcagcagcaactcgtcgaggtcgatggatcatctgccctg
gtcatcgaccggtccgcgcaaatcgagtttccgcgttcgcgcccgcgccccggcgcgctg
gaacccgcgccgagcgatctcgtggcgcttgcaggcggcggcgcgcagaccagcgactct
atccgtcgcgtcgtctccagcgttcgccagggtatcccggcgctcatattcggggaaaca
ggcacaggaaaagaacggttcgctcgggcgctccatgcttacctcgccgcgccgggcgag
cctttcatccgcttcgactgcgaggcctttgccggcacgatgcggaactgcgaaaatgat
aagtgcgacgactttgaagagagagtgcgtgccgcggaaagcggcacactctttctcgat
tgcctcggggccctaccctcatctgcgcaaacgcggcttctcgatttcttactcgaagag
cgccctttgcaagtggacaaatgcaaagggcgtcccgctcgaatcatcagcgccagccgc
gctgacatcgaggacaaggtgcggaacggatctttccgatccgatctctattatattctc
agaggcgcaacgttggagctgccgccgttgcgcagccggcacgaaaagcctgcgttgatc
aagcggcttttgcaggaagtcgatccccagcttcacctcagcgacgatgccctgcaactg
ctgatgaactacacatggccgggcaacattcgcgagcttggcctcgttctccacgtcgcc
gcagcgtcatgcagcaatcagatcatcacggcacgtgatattgatgtcgtcgccgtcaag
catgaaaatgccgatgccccgggcgagggccagccgggttcgacaattgccgccgcggag
cggtccgtcgtcctcaagcagctcgagaacaacaacttcgatattgccaagacagcggcg
gcgcttggcatgagccgggcaacgttgtaccgacgcatgaagcgctacaacgttaccaag
gtgatcgtcgcgcgtccttcgattgaaaaattctga
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