Methylovirgula ligni: CWB41_05125
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Entry
CWB41_05125 CDS
T05824
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mlg
Methylovirgula ligni
Pathway
mlg03030
DNA replication
mlg03430
Mismatch repair
mlg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mlg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CWB41_05125 (dnaQ)
03430 Mismatch repair
CWB41_05125 (dnaQ)
03440 Homologous recombination
CWB41_05125 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mlg03032
]
CWB41_05125 (dnaQ)
03400 DNA repair and recombination proteins [BR:
mlg03400
]
CWB41_05125 (dnaQ)
Enzymes [BR:
mlg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CWB41_05125 (dnaQ)
DNA replication proteins [BR:
mlg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CWB41_05125 (dnaQ)
DNA repair and recombination proteins [BR:
mlg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CWB41_05125 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QAY95189
LinkDB
All DBs
Position
1060550..1061245
Genome browser
AA seq
231 aa
AA seq
DB search
MREIVFDTETTGLDPASGHRIVEIGCVEILNAIPTGQTFHFYLDPERDMPEEAFRVHGLS
LEFLTGKPKFAEIAEQFLSFIADAVLVAHNAEFDLRFVNAELAVLGHPPLKSERIVDTLA
LARRRHPGAPNSLDALCQRYGIDTKRRTKHGALLDAEILAEVYAELNGGRQASLSLQSAA
GNALRAAVRAERPAPLAPLIVAAEWAAHAAFIATLGNKAIWRRYLPESDEA
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaatcgtcttcgataccgagaccacgggcctcgatcccgcgtctggccacagg
atcgtcgagatcggttgcgtcgaaatcctcaacgccattccgaccggacagacgtttcat
ttctatctcgaccccgagcgtgacatgcccgaggaggcctttcgcgtccacggcctttcg
ctcgagtttctgaccggcaagccaaaattcgccgagatcgcagagcaattcctcagcttc
atcgccgatgctgtgctggttgcgcataatgccgagttcgacctgcgcttcgtcaatgcg
gagcttgcggtgctgggccacccgccgctgaagtcagagcggatcgttgatacgctcgcg
ctcgcgcggcgtcgccaccctggcgcgcccaactccctcgatgcgctctgccagcgctat
ggcatcgatacgaaacggcgcaccaagcacggtgcgctgctcgacgcggaaattctcgcc
gaggtctatgcggaattgaacggcggccggcaggcgagcctgtcgttgcagagcgccgcc
ggcaatgcgctgcgcgcggcggtccgcgcggagcggccggcgccactcgcgccgctgatc
gtggcggccgaatgggcagcccatgccgccttcatcgccactcttggcaacaaggcgatc
tggcgccgctatctgccggaatccgacgaggcctga
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